NCBI C++ ToolKit
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#include <ncbi_pch.hpp>
#include <corelib/ncbistd.hpp>
#include <objects/general/User_object.hpp>
#include <objects/general/Object_id.hpp>
#include <objects/seq/Bioseq.hpp>
#include <objects/seq/Seq_ext.hpp>
#include <objects/seq/Seg_ext.hpp>
#include <objects/seq/Delta_ext.hpp>
#include <objects/seq/Delta_seq.hpp>
#include <objects/seq/Annot_descr.hpp>
#include <objects/seq/Annotdesc.hpp>
#include <objects/seqset/Bioseq_set.hpp>
#include <objects/seqloc/Textseq_id.hpp>
#include <objects/seqloc/Patent_seq_id.hpp>
#include <objects/general/Dbtag.hpp>
#include <objects/misc/sequence_macros.hpp>
#include <objmgr/scope.hpp>
#include <objmgr/bioseq_handle.hpp>
#include <objmgr/seq_entry_handle.hpp>
#include <objmgr/seq_entry_ci.hpp>
#include <objmgr/seqdesc_ci.hpp>
#include <objmgr/util/sequence.hpp>
#include <objmgr/seq_loc_mapper.hpp>
#include <objmgr/seq_map.hpp>
#include <objmgr/seq_map_ci.hpp>
#include <objmgr/feat_ci.hpp>
#include <objmgr/bioseq_ci.hpp>
#include <objmgr/annot_ci.hpp>
#include <objtools/format/context.hpp>
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Functions | |
USING_SCOPE (sequence) | |
static void | s_GetNameForBioseq (const CBioseq_Handle &seq, string &name) |
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static |
Definition at line 1175 of file context.cpp.
References CTextseq_id_Base::CanGetName(), CBioseq_Handle::GetId(), CTextseq_id_Base::GetName(), CSeq_id::GetTextseq_Id(), CSeq_id_Base::IsDdbj(), CSeq_id_Base::IsEmbl(), CSeq_id_Base::IsGenbank(), CSeq_id_Base::IsTpd(), CSeq_id_Base::IsTpe(), CSeq_id_Base::IsTpg(), and ITERATE.
Referenced by CMasterContext::x_SetBaseName().
USING_SCOPE | ( | sequence | ) |