omssa.cpp File Reference

#include <ncbi_pch.hpp>
#include <util/miscmath.h>
#include <algo/blast/core/ncbi_math.h>
#include <util/compress/bzip2.hpp>
#include "SpectrumSet.hpp"
#include "omssa.hpp"
#include "pepxml.hpp"
#include <fstream>
#include <string>
#include <list>
#include <deque>
#include <algorithm>
#include <math.h>

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Classes
struct	CMassMaskCompare

Functions
	USING_SCOPE (objects)
	USING_SCOPE (omssa)
int	PositiveSign (int input)
	DEFINE_STATIC_FAST_MUTEX (iSearchMutex)
	DEFINE_STATIC_FAST_MUTEX (PeakSetMutex)
	DEFINE_STATIC_FAST_MUTEX (PeaksExaminedMutex)

Variables
	USING_NCBI_SCOPE

Function Documentation

DEFINE_STATIC_FAST_MUTEX() [1/3]

DEFINE_STATIC_FAST_MUTEX

(

iSearchMutex

)

DEFINE_STATIC_FAST_MUTEX() [2/3]

DEFINE_STATIC_FAST_MUTEX

(

PeakSetMutex

)

DEFINE_STATIC_FAST_MUTEX() [3/3]

DEFINE_STATIC_FAST_MUTEX

(

PeaksExaminedMutex

)

PositiveSign()

int PositiveSign

(

int

input

)

Definition at line 557 of file omssa.cpp.

References abs, and input().

Referenced by CSearch< LEGACY, NHITS >::Spectrum2Peak().

USING_SCOPE() [1/2]

USING_SCOPE

(

objects

)

USING_SCOPE() [2/2]

USING_SCOPE

(

omssa

)

Variable Documentation

USING_NCBI_SCOPE

USING_NCBI_SCOPE

Definition at line 54 of file omssa.cpp.