#include <objects/omssa/omssa__.hpp>#include <util/math/miscmath.h>#include <algo/blast/core/ncbi_math.h>#include "msscore.hpp"
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Macros | |
| #define | BEGIN_OMSSA_SCOPE BEGIN_NCBI_SCOPE BEGIN_SCOPE(objects) BEGIN_SCOPE(omssa) |
| #define | END_OMSSA_SCOPE END_NCBI_SCOPE END_SCOPE(objects) END_SCOPE(omssa) |
| #define | USING_OMSSA_SCOPE USING_NCBI_SCOPE; USING_SCOPE(objects); USING_SCOPE(omssa); |
| #define | MSLNGAMMA BLAST_LnGammaInt |
| #define | MSERF NCBI_Erf |
| #define | MSDOUBLELIMIT 1e-300L |
Typedefs | |
| typedef int | TMSMZ |
| m/z type More... | |
| typedef unsigned | TMSIntensity |
| intensity type More... | |
| typedef signed char | TMSIonSeries |
| ion type, e.g. More... | |
| typedef signed char | TMSCharge |
| charge type More... | |
| typedef short | TMSNumber |
| ion sequence number, starting from 0. More... | |
| typedef double | TMSExpIons |
| density of experimental ions type More... | |
| typedef int | TMSRank |
| intensity rank More... | |
Macro Definition Documentation
◆ BEGIN_OMSSA_SCOPE
| #define BEGIN_OMSSA_SCOPE BEGIN_NCBI_SCOPE BEGIN_SCOPE(objects) BEGIN_SCOPE(omssa) |
Definition at line 45 of file omssascore.hpp.
◆ END_OMSSA_SCOPE
| #define END_OMSSA_SCOPE END_NCBI_SCOPE END_SCOPE(objects) END_SCOPE(omssa) |
Definition at line 47 of file omssascore.hpp.
◆ MSDOUBLELIMIT
| #define MSDOUBLELIMIT 1e-300L |
Definition at line 79 of file omssascore.hpp.
◆ MSERF
| #define MSERF NCBI_Erf |
Definition at line 76 of file omssascore.hpp.
◆ MSLNGAMMA
| #define MSLNGAMMA BLAST_LnGammaInt |
Definition at line 75 of file omssascore.hpp.
◆ USING_OMSSA_SCOPE
| #define USING_OMSSA_SCOPE USING_NCBI_SCOPE; USING_SCOPE(objects); USING_SCOPE(omssa); |
Definition at line 49 of file omssascore.hpp.
Typedef Documentation
◆ TMSCharge
| typedef signed char TMSCharge |
charge type
Definition at line 64 of file omssascore.hpp.
◆ TMSExpIons
| typedef double TMSExpIons |
density of experimental ions type
Definition at line 70 of file omssascore.hpp.
◆ TMSIntensity
| typedef unsigned TMSIntensity |
intensity type
Definition at line 58 of file omssascore.hpp.
◆ TMSIonSeries
| typedef signed char TMSIonSeries |
◆ TMSMZ
m/z type
Definition at line 55 of file omssascore.hpp.
◆ TMSNumber
| typedef short TMSNumber |
ion sequence number, starting from 0.
Definition at line 67 of file omssascore.hpp.
◆ TMSRank
intensity rank
Definition at line 73 of file omssascore.hpp.
