orf_search_tool.cpp File Reference

#include <ncbi_pch.hpp>
#include <gui/core/data_mining_service.hpp>
#include "orf_search_tool.hpp"
#include <corelib/ncbiapp.hpp>
#include <corelib/ncbifile.hpp>
#include <corelib/ncbireg.hpp>
#include <gui/widgets/wx/message_box.hpp>
#include <gui/widgets/wx/sys_path.hpp>
#include <objects/seqfeat/Cdregion.hpp>
#include <objects/seqfeat/Seq_feat.hpp>
#include <objects/seq/Seq_annot.hpp>
#include <gui/objutils/label.hpp>
#include <gui/objutils/utils.hpp>
#include <gui/widgets/wx/ui_tool_registry.hpp>
#include <gui/utils/app_job_dispatcher.hpp>
#include <gui/utils/extension_impl.hpp>
#include <objmgr/util/sequence.hpp>
#include <objects/seqfeat/Genetic_code.hpp>
#include <objects/seqfeat/Genetic_code_table.hpp>
#include <algo/sequence/orf.hpp>
#include <objects/taxon1/taxon1.hpp>
#include <wx/sizer.h>
#include <wx/stattext.h>
#include <wx/choice.h>
#include <wx/srchctrl.h>
#include <wx/filename.h>
#include <wx/dir.h>

Include dependency graph for orf_search_tool.cpp:

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Classes
class	COrfSearchTableModel

Macros
#define	ID_COMBOBOX   10003
#define	ID_TEXT   11414
#define	ID_COMBOBOX_UPDATE   10111

Functions
	USING_SCOPE (objects)

Variables
static const char *	kOrfGencode = "OrfGencode"
static const char *	kOrfStartOrf = "OrfStartOrf"
static const char *	kOrfMinPairs = "OrfMinPairs"
static const char *	kOrfFilters = "OrfFilters"
static const wxChar *	kKozakFile = wxT("kozak.ini")
static string	sAutoSelect = "Auto Select"

Macro Definition Documentation

ID_COMBOBOX

#define ID_COMBOBOX   10003

Definition at line 71 of file orf_search_tool.cpp.

ID_COMBOBOX_UPDATE

#define ID_COMBOBOX_UPDATE   10111

Definition at line 73 of file orf_search_tool.cpp.

ID_TEXT

#define ID_TEXT   11414

Definition at line 72 of file orf_search_tool.cpp.

Function Documentation

USING_SCOPE()

USING_SCOPE

(

objects

)

Variable Documentation

kKozakFile

const wxChar* kKozakFile = wxT("kozak.ini")

static

Definition at line 83 of file orf_search_tool.cpp.

Referenced by COrfSearchForm::x_UpdateKozak().

kOrfFilters

const char* kOrfFilters = "OrfFilters"

static

Definition at line 81 of file orf_search_tool.cpp.

Referenced by COrfSearchForm::x_LoadSettings(), and COrfSearchForm::x_SaveSettings().

kOrfGencode

const char* kOrfGencode = "OrfGencode"

static

Definition at line 78 of file orf_search_tool.cpp.

Referenced by COrfSearchForm::x_LoadSettings(), and COrfSearchForm::x_SaveSettings().

kOrfMinPairs

const char* kOrfMinPairs = "OrfMinPairs"

static

Definition at line 80 of file orf_search_tool.cpp.

Referenced by COrfSearchForm::x_LoadSettings(), and COrfSearchForm::x_SaveSettings().

kOrfStartOrf

const char* kOrfStartOrf = "OrfStartOrf"

static

Definition at line 79 of file orf_search_tool.cpp.

Referenced by COrfSearchForm::x_LoadSettings(), and COrfSearchForm::x_SaveSettings().

sAutoSelect

string sAutoSelect = "Auto Select"

static

Definition at line 324 of file orf_search_tool.cpp.

Referenced by COrfSearchForm::GetWidget(), and COrfSearchJob::x_DoSearch().