#include <ncbi_pch.hpp>
#include <algorithm>
#include <gui/packages/pkg_alignment/phy_tree_view.hpp>
#include <gui/widgets/data/query_panel_event.hpp>
#include <gui/widgets/phylo_tree/phylo_tree_widget.hpp>
#include <gui/widgets/phylo_tree/phylo_tree_ds.hpp>
#include <gui/widgets/phylo_tree/phylo_tree.hpp>
#include <gui/widgets/phylo_tree/phylo_tree_reader.hpp>
#include <gui/objects/GBWorkspace.hpp>
#include <gui/objects/WorkspaceFolder.hpp>
#include <gui/core/project_service.hpp>
#include <gui/framework/workbench.hpp>
#include <gui/framework/app_task_service.hpp>
#include <gui/framework/app_job_task.hpp>
#include <gui/framework/status_bar_service.hpp>
#include <gui/widgets/wx/fileartprov.hpp>
#include <gui/widgets/wx/ui_command.hpp>
#include <gui/widgets/wx/wx_utils.hpp>
#include <gui/widgets/gl/attrib_menu.hpp>
#include <gui/objutils/utils.hpp>
#include <gui/objutils/label.hpp>
#include <gui/objutils/object_index.hpp>
#include <gui/objutils/taxid_sel_set.hpp>
#include <gui/objutils/biotree_selection.hpp>
#include <serial/serialimpl.hpp>
#include <objects/gbproj/AbstractProjectItem.hpp>
#include <objects/general/User_object.hpp>
#include <objects/general/User_field.hpp>
#include <objects/general/Object_id.hpp>
#include <objects/biotree/FeatureDictSet.hpp>
#include <objects/biotree/FeatureDescr.hpp>
#include <objects/biotree/NodeSet.hpp>
#include <objects/biotree/Node.hpp>
#include <objects/biotree/NodeFeatureSet.hpp>
#include <objects/biotree/NodeFeature.hpp>
#include <objects/seqloc/Seq_interval.hpp>
#include <gui/packages/pkg_alignment/export_tree_dlg.hpp>
#include <gui/packages/pkg_alignment/phy_export_job.hpp>
#include <util/compress/lzo.hpp>
#include <corelib/ncbitime.hpp>
#include <wx/menu.h>
#include <wx/app.h>

Include dependency graph for phy_tree_view.cpp:

Go to the SVN repository for this file.

Classes
class	CSelNodeHandle

class	CPhyRebuildIndexVisitor

class	CChangePhyloTreeCommand

struct	CChangePhyloTreeCommand::SBTree

class	CChangePhyloSelectionSetCmd
	SelectionSets are stored in the biotreecontainer's user-data object so we need a special change command object to handle it's undo-and redo. More...

class	SUpdateFeatureCompare

class	CChangePhyloPropertyCmd

class	CChangePhyloExpandCollapseCmd

class	CPhyTreePanel

class	visitor_taxid_query

class	visitor_string_query

class	CPhyloTreeSelectionRoot

Functions
	USING_SCOPE (objects)

Variables
float	m_CreateUndoCommand
	Timers: More...

float	m_ExecuteUndoCommand

float	m_CreateProperyUndoCommand

float	m_ExecutePropertyCommand

float	m_ExecOnBioTreeChanged

float	m_DataSourceInitTimer

CProjectViewTypeDescriptor	s_PhyTreeViewTypeDescr ("Tree View", "phylo_tree_view", "Tree View", "View for graphical presentation of hierarchical data (phylogenetic tree, taxonomy tree, etc.) using various layout methods", "PHY_TREE_VIEW", "Alignment", false, "BioTreeContainer", eOneObjectAccepted)

Function Documentation

◆ USING_SCOPE()

USING_SCOPE ( objects )

Variable Documentation

◆ m_CreateProperyUndoCommand

float m_CreateProperyUndoCommand

Definition at line 98 of file phy_tree_view.cpp.

Referenced by CPhyTreeView::CPhyTreeView(), and CPhyTreeView::OnSomethingEdited().

◆ m_CreateUndoCommand

float m_CreateUndoCommand

Timers:

Definition at line 95 of file phy_tree_view.cpp.

Referenced by CPhyTreeView::CPhyTreeView(), and CPhyTreeView::OnSomethingEdited().

◆ m_DataSourceInitTimer

float m_DataSourceInitTimer

Definition at line 102 of file phy_tree_view.cpp.

Referenced by CPhyTreeView::CPhyTreeView(), and CPhyTreeView::OnBioTreeChanged().

◆ m_ExecOnBioTreeChanged

float m_ExecOnBioTreeChanged

Definition at line 101 of file phy_tree_view.cpp.

Referenced by CPhyTreeView::CPhyTreeView(), and CChangePhyloTreeCommand::Execute().

◆ m_ExecutePropertyCommand

float m_ExecutePropertyCommand

Definition at line 99 of file phy_tree_view.cpp.

Referenced by CPhyTreeView::CPhyTreeView(), CChangePhyloPropertyCmd::Execute(), CChangePhyloExpandCollapseCmd::Execute(), and CPhyTreeView::OnSomethingEdited().

◆ m_ExecuteUndoCommand

float m_ExecuteUndoCommand

Definition at line 96 of file phy_tree_view.cpp.

Referenced by CPhyTreeView::CPhyTreeView(), CChangePhyloTreeCommand::Execute(), and CPhyTreeView::OnSomethingEdited().

◆ s_PhyTreeViewTypeDescr

CProjectViewTypeDescriptor s_PhyTreeViewTypeDescr("Tree View", "phylo_tree_view", "Tree View", "View for graphical presentation of hierarchical data (phylogenetic tree, taxonomy tree, etc.) using various layout methods", "PHY_TREE_VIEW", "Alignment", false, "BioTreeContainer", eOneObjectAccepted)	(	"Tree View"	,
		"phylo_tree_view"	,
		"Tree View"	,
		"View for graphical presentation of hierarchical data (phylogenetic tree, taxonomy tree, etc.) using various layout methods"	,
		"PHY_TREE_VIEW"	,
		"Alignment"	,
		false	,
		"BioTreeContainer"	,
		eOneObjectAccepted
	)

Referenced by CPhyTreeViewFactory::GetProjectViewTypeDescriptor(), and CPhyTreeView::GetTypeDescriptor().

Classes

Functions

Variables