NCBI C++ ToolKit
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#include <corelib/ncbiobj.hpp>
#include <algo/phy_tree/bio_tree.hpp>
#include <algo/phy_tree/bio_tree_conv.hpp>
#include <algo/phy_tree/dist_methods.hpp>
#include <objects/biotree/BioTreeContainer.hpp>
#include <objtools/alnmgr/alnmix.hpp>
#include <util/range.hpp>
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Classes | |
class | CPhyTreeCalc |
Computaion of distance-based phylognetic tree. More... | |
class | CPhyTreeCalc::CDistMatrix |
Distance matrix (square, symmetric with zeros on diagnol) More... | |
struct | CPhyTreeCalc::SLink |
Structure for storing divergences between sequences as list of links. More... | |
class | CPhyTreeCalcException |
Guide tree calc exceptions. More... | |
Functions | |
USING_SCOPE (objects) | |
USING_SCOPE | ( | objects | ) |