psibl2seq_unit_test.cpp File Reference

#include <ncbi_pch.hpp>
#include <corelib/test_boost.hpp>
#include <serial/iterator.hpp>
#include <algo/blast/api/psibl2seq.hpp>
#include "psiblast_aux_priv.hpp"
#include <algo/blast/api/bl2seq.hpp>
#include <algo/blast/api/objmgr_query_data.hpp>
#include <objects/scoremat/Pssm.hpp>
#include <objects/scoremat/PssmFinalData.hpp>
#include <objects/scoremat/PssmWithParameters.hpp>
#include <objects/scoremat/PssmIntermediateData.hpp>
#include <objects/seqalign/Dense_seg.hpp>
#include <objects/seqalign/Seq_align.hpp>
#include <objects/seqset/Seq_entry.hpp>
#include <objtools/simple/simple_om.hpp>
#include "test_objmgr.hpp"
#include "blast_test_util.hpp"
#include "seqalign_cmp.hpp"
#include "seqalign_set_convert.hpp"

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Classes
class	CPsiBl2SeqTestFixture

Functions
	BOOST_AUTO_TEST_CASE (TestComparePssmWithMultipleSequences)

Function Documentation

BOOST_AUTO_TEST_CASE()

BOOST_AUTO_TEST_CASE

(

TestComparePssmWithMultipleSequences

)

Definition at line 339 of file psibl2seq_unit_test.cpp.

References ctll::empty(), Get(), CSeq_align_set_Base::Get(), results, CPsiBl2Seq::Run(), and ncbi::grid::netcache::search::fields::size.