NCBI C++ ToolKit
Functions
psl_record.cpp File Reference
#include <ncbi_pch.hpp>
#include <objects/seqalign/Seq_align.hpp>
#include <objects/seqalign/Dense_seg.hpp>
#include <objects/seqalign/Spliced_seg.hpp>
#include <objects/seqalign/Spliced_exon.hpp>
#include <objects/seqalign/Sparse_seg.hpp>
#include <objects/seqalign/Sparse_align.hpp>
#include <objects/seqalign/Product_pos.hpp>
#include <objects/seqalign/Prot_pos.hpp>
#include <objects/seqalign/Spliced_exon_chunk.hpp>
#include <objects/seqalign/Score.hpp>
#include <objects/general/Object_id.hpp>
#include <objects/seq/seq_id_handle.hpp>
#include <objmgr/scope.hpp>
#include <objmgr/bioseq_handle.hpp>
#include <objmgr/seq_vector.hpp>
#include <objmgr/util/sequence.hpp>
#include <objtools/writers/writer_exception.hpp>
#include <objtools/writers/write_util.hpp>
#include <objtools/writers/genbank_id_resolve.hpp>
#include "psl_record.hpp"
#include <util/sequtil/sequtil_manip.hpp>
+ Include dependency graph for psl_record.cpp:

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Functions

 USING_SCOPE (objects)
 
static void sExonChunkAppendStats (const CSpliced_exon_chunk &chunk, int &matchSize, int &misMatchSize, int &productInsertionSize, int &genomicInsertionSize)
 

Function Documentation

◆ sExonChunkAppendStats()

static void sExonChunkAppendStats ( const CSpliced_exon_chunk chunk,
int matchSize,
int misMatchSize,
int productInsertionSize,
int genomicInsertionSize 
)
static

◆ USING_SCOPE()

USING_SCOPE ( objects  )
Modified on Wed Feb 21 09:57:30 2024 by modify_doxy.py rev. 669887