#include <string>
#include <chrono>

Include dependency graph for pubseq_gateway_types.hpp:

This graph shows which files directly or indirectly include this file:

Typedefs
typedef int	TProcessorPriority

using	psg_clock_t = chrono::steady_clock

using	psg_time_point_t = psg_clock_t::time_point

typedef string	TAuthToken

Enumerations
enum	EPSGS_PubseqGatewayErrorCode { ePSGS_UnknownSatellite = 300 , ePSGS_BadURL = 301 , ePSGS_NoUsefulCassandra = 302 , ePSGS_MalformedParameter = 304 , ePSGS_UnknownResolvedSatellite = 305 , ePSGS_NoBioseqInfo = 306 , ePSGS_BioseqInfoError = 307 , ePSGS_BadID2Info = 308 , ePSGS_UnpackingError = 309 , ePSGS_UnknownError = 310 , ePSGS_NoBlobPropsError = 311 , ePSGS_UnresolvedSeqId = 312 , ePSGS_InsufficientArguments = 313 , ePSGS_InvalidId2Info = 314 , ePSGS_NoSplitHistoryError = 315 , ePSGS_NoBioseqInfoForGiError = 316 , ePSGS_BioseqInfoMultipleRecords = 318 , ePSGS_ServerLogicError = 319 , ePSGS_BioseqInfoAccessionAdjustmentError = 320 , ePSGS_NoProcessor = 321 , ePSGS_ShuttingDown = 322 , ePSGS_Unauthorised = 323 , ePSGS_TestIOError = 324 , ePSGS_StatisticsError = 325 , ePSGS_AckAlertError = 326 , ePSGS_GetAlertsError = 327 , ePSGS_ShutdownError = 328 , ePSGS_StatusError = 329 , ePSGS_InfoError = 330 , ePSGS_ConfigError = 331 , ePSGS_HealthError = 332 , ePSGS_TooManyRequests = 333 , ePSGS_RequestCancelled = 334 , ePSGS_BlobRetrievalIsNotAuthorized = 335 , ePSGS_RequestTimeout = 336 , ePSGS_NotFoundAndNotInstantiated = 337 , ePSGS_IPGNotFound = 338 , ePSGS_IPGKeyspaceNotAvailable = 339 , ePSGS_NoWebCubbyUserCookieError = 340 , ePSGS_MyNCBIError = 341 , ePSGS_MyNCBINotFound = 342 , ePSGS_SecureSatUnauthorized = 343 , ePSGS_CassConnectionError = 344 , ePSGS_MyNCBIRequestInitiatorDestroyed = 345 , ePSGS_BlobChunkAfterFallbackRequested = 346 , ePSGS_NotFoundID2BlobPropWithFallback = 347 , ePSGS_ID2ChunkErrorWithFallback = 348 , ePSGS_ID2ChunkErrorAfterFallbackRequested = 349 , ePSGS_ID2InfoParseErrorFallback = 350 , ePSGS_ConnectionExceedsSoftLimit = 351 }

enum	EPSGS_ResolutionResult { ePSGS_Si2csiCache , ePSGS_Si2csiDB , ePSGS_BioseqCache , ePSGS_BioseqDB , ePSGS_NotResolved , ePSGS_PostponedForDB }

enum	EPSGS_SeqIdParsingResult { ePSGS_ParsedOK , ePSGS_ParseFailed }

enum	EPSGS_DbFetchType { ePSGS_BlobBySeqIdFetch , ePSGS_BlobBySatSatKeyFetch , ePSGS_AnnotationFetch , ePSGS_AnnotationBlobFetch , ePSGS_TSEChunkFetch , ePSGS_BioseqInfoFetch , ePSGS_Si2csiFetch , ePSGS_SplitHistoryFetch , ePSGS_PublicCommentFetch , ePSGS_AccVerHistoryFetch , ePSGS_IPGResolveFetch , ePSGS_UnknownFetch }

enum	EPSGS_CacheLookupResult { ePSGS_CacheHit , ePSGS_CacheNotHit , ePSGS_CacheFailure }

enum	EPSGS_AccessionAdjustmentResult { ePSGS_NotRequired , ePSGS_AdjustedWithGi , ePSGS_AdjustedWithAny , ePSGS_SeqIdsEmpty , ePSGS_LogicError }

enum	EPSGS_ReplyMimeType { ePSGS_JsonMime , ePSGS_HtmlMime , ePSGS_BinaryMime , ePSGS_PlainTextMime , ePSGS_ImageMime , ePSGS_PSGMime , ePSGS_NotSet }

enum	EPSGS_BlobSkipReason { ePSGS_BlobExcluded , ePSGS_BlobInProgress , ePSGS_BlobSent }

enum	EPSGS_StartupDataState { ePSGS_NoCassConnection , ePSGS_NoValidCassMapping , ePSGS_NoCassCache , ePSGS_StartupDataOK }

enum	EPSGS_LoggingFlag { ePSGS_NeedLogging , ePSGS_SkipLogging }

enum	EPSGS_StatusUpdateFlag { ePSGS_NeedStatusUpdate , ePSGS_SkipStatusUpdate }

Variables
const int	kUnknownPriority = -1

Typedef Documentation

◆ psg_clock_t

using psg_clock_t = chrono::steady_clock

Definition at line 51 of file pubseq_gateway_types.hpp.

◆ psg_time_point_t

using psg_time_point_t = psg_clock_t::time_point

Definition at line 52 of file pubseq_gateway_types.hpp.

◆ TAuthToken

typedef string TAuthToken

Definition at line 56 of file pubseq_gateway_types.hpp.

◆ TProcessorPriority

typedef int TProcessorPriority

Definition at line 41 of file pubseq_gateway_types.hpp.

Enumeration Type Documentation

◆ EPSGS_AccessionAdjustmentResult

enum EPSGS_AccessionAdjustmentResult

Enumerator
ePSGS_NotRequired
ePSGS_AdjustedWithGi
ePSGS_AdjustedWithAny
ePSGS_SeqIdsEmpty
ePSGS_LogicError

Definition at line 165 of file pubseq_gateway_types.hpp.

◆ EPSGS_BlobSkipReason

enum EPSGS_BlobSkipReason

Enumerator
ePSGS_BlobExcluded
ePSGS_BlobInProgress
ePSGS_BlobSent

Definition at line 186 of file pubseq_gateway_types.hpp.

◆ EPSGS_CacheLookupResult

enum EPSGS_CacheLookupResult

Enumerator
ePSGS_CacheHit
ePSGS_CacheNotHit
ePSGS_CacheFailure

Definition at line 158 of file pubseq_gateway_types.hpp.

◆ EPSGS_DbFetchType

enum EPSGS_DbFetchType

Enumerator
ePSGS_BlobBySeqIdFetch
ePSGS_BlobBySatSatKeyFetch
ePSGS_AnnotationFetch
ePSGS_AnnotationBlobFetch
ePSGS_TSEChunkFetch
ePSGS_BioseqInfoFetch
ePSGS_Si2csiFetch
ePSGS_SplitHistoryFetch
ePSGS_PublicCommentFetch
ePSGS_AccVerHistoryFetch
ePSGS_IPGResolveFetch
ePSGS_UnknownFetch

Definition at line 142 of file pubseq_gateway_types.hpp.

◆ EPSGS_LoggingFlag

enum EPSGS_LoggingFlag

Enumerator
ePSGS_NeedLogging
ePSGS_SkipLogging

Definition at line 207 of file pubseq_gateway_types.hpp.

◆ EPSGS_PubseqGatewayErrorCode

enum EPSGS_PubseqGatewayErrorCode

Enumerator
ePSGS_UnknownSatellite
ePSGS_BadURL
ePSGS_NoUsefulCassandra
ePSGS_MalformedParameter
ePSGS_UnknownResolvedSatellite
ePSGS_NoBioseqInfo
ePSGS_BioseqInfoError
ePSGS_BadID2Info
ePSGS_UnpackingError
ePSGS_UnknownError
ePSGS_NoBlobPropsError
ePSGS_UnresolvedSeqId
ePSGS_InsufficientArguments
ePSGS_InvalidId2Info
ePSGS_NoSplitHistoryError
ePSGS_NoBioseqInfoForGiError
ePSGS_BioseqInfoMultipleRecords
ePSGS_ServerLogicError
ePSGS_BioseqInfoAccessionAdjustmentError
ePSGS_NoProcessor
ePSGS_ShuttingDown
ePSGS_Unauthorised
ePSGS_TestIOError
ePSGS_StatisticsError
ePSGS_AckAlertError
ePSGS_GetAlertsError
ePSGS_ShutdownError
ePSGS_StatusError
ePSGS_InfoError
ePSGS_ConfigError
ePSGS_HealthError
ePSGS_TooManyRequests
ePSGS_RequestCancelled
ePSGS_BlobRetrievalIsNotAuthorized
ePSGS_RequestTimeout
ePSGS_NotFoundAndNotInstantiated
ePSGS_IPGNotFound
ePSGS_IPGKeyspaceNotAvailable
ePSGS_NoWebCubbyUserCookieError
ePSGS_MyNCBIError
ePSGS_MyNCBINotFound
ePSGS_SecureSatUnauthorized
ePSGS_CassConnectionError
ePSGS_MyNCBIRequestInitiatorDestroyed
ePSGS_BlobChunkAfterFallbackRequested
ePSGS_NotFoundID2BlobPropWithFallback
ePSGS_ID2ChunkErrorWithFallback
ePSGS_ID2ChunkErrorAfterFallbackRequested
ePSGS_ID2InfoParseErrorFallback
ePSGS_ConnectionExceedsSoftLimit

Definition at line 60 of file pubseq_gateway_types.hpp.

◆ EPSGS_ReplyMimeType

enum EPSGS_ReplyMimeType

Enumerator
ePSGS_JsonMime
ePSGS_HtmlMime
ePSGS_BinaryMime
ePSGS_PlainTextMime
ePSGS_ImageMime
ePSGS_PSGMime
ePSGS_NotSet

Definition at line 174 of file pubseq_gateway_types.hpp.

◆ EPSGS_ResolutionResult

enum EPSGS_ResolutionResult

Enumerator
ePSGS_Si2csiCache
ePSGS_Si2csiDB
ePSGS_BioseqCache
ePSGS_BioseqDB
ePSGS_NotResolved
ePSGS_PostponedForDB

Definition at line 126 of file pubseq_gateway_types.hpp.

◆ EPSGS_SeqIdParsingResult

enum EPSGS_SeqIdParsingResult

Enumerator
ePSGS_ParsedOK
ePSGS_ParseFailed

Definition at line 136 of file pubseq_gateway_types.hpp.

◆ EPSGS_StartupDataState

enum EPSGS_StartupDataState

Enumerator
ePSGS_NoCassConnection
ePSGS_NoValidCassMapping
ePSGS_NoCassCache
ePSGS_StartupDataOK

Definition at line 199 of file pubseq_gateway_types.hpp.

◆ EPSGS_StatusUpdateFlag

enum EPSGS_StatusUpdateFlag

Enumerator
ePSGS_NeedStatusUpdate
ePSGS_SkipStatusUpdate

Definition at line 213 of file pubseq_gateway_types.hpp.

Variable Documentation

◆ kUnknownPriority

const int kUnknownPriority = -1

Definition at line 42 of file pubseq_gateway_types.hpp.

Referenced by SPSGS_AnnotRequest::RegisterProcessedName(), CPSGS_AnnotProcessor::x_SendAnnotDataToClient(), and CPSGS_AnnotProcessor::x_SendBioseqInfo().

Typedefs

Enumerations

Variables