NCBI C++ ToolKit
Functions
search_strategy_unit_test.cpp File Reference
#include <ncbi_pch.hpp>
#include <corelib/test_boost.hpp>
#include <algo/blast/api/search_strategy.hpp>
#include <algo/blast/api/remote_blast.hpp>
#include <algo/blast/api/blast_nucl_options.hpp>
#include <algo/blast/api/blast_prot_options.hpp>
#include <algo/blast/api/psiblast_options.hpp>
#include <algo/blast/api/phiblast_prot_options.hpp>
#include <algo/blast/api/blast_advprot_options.hpp>
#include <algo/blast/api/objmgr_query_data.hpp>
#include <objmgr/object_manager.hpp>
#include <objects/scoremat/PssmWithParameters.hpp>
#include <objects/scoremat/Pssm.hpp>
#include "test_objmgr.hpp"
#include <serial/serial.hpp>
#include <serial/objostr.hpp>
#include <serial/exception.hpp>
#include <util/range.hpp>
+ Include dependency graph for search_strategy_unit_test.cpp:

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Functions

 BOOST_AUTO_TEST_CASE (emptyInput)
 
 BOOST_AUTO_TEST_CASE (testMegablast)
 
 BOOST_AUTO_TEST_CASE (testBlastp)
 
 BOOST_AUTO_TEST_CASE (testBlastnBl2seq)
 
 BOOST_AUTO_TEST_CASE (LoadWebPsiBlastSearchStrategyAfterRound1)
 
 BOOST_AUTO_TEST_CASE (LoadWebPsiBlastSearchStrategyAfterRound2)
 
 BOOST_AUTO_TEST_CASE (LoadPhiBlastSearchStrategy)
 
 BOOST_AUTO_TEST_CASE (ExportStrategy_FullQuery)
 
 BOOST_AUTO_TEST_CASE (ExportStrategy_QueryWithRange)
 
 BOOST_AUTO_TEST_CASE (ExportStrategy_QueryWithLocalIds)
 
 BOOST_AUTO_TEST_CASE (ExportStrategy_QueryWithGIs)
 
 BOOST_AUTO_TEST_CASE (ExportStrategy_CBlastOptions)
 
 BOOST_AUTO_TEST_CASE (LoadHardMaskDBSearchStrategy)
 
 BOOST_AUTO_TEST_CASE (ExportStrategy_DBSoftMask)
 

Function Documentation

◆ BOOST_AUTO_TEST_CASE() [1/14]

BOOST_AUTO_TEST_CASE ( emptyInput  )

Definition at line 61 of file search_strategy_unit_test.cpp.

◆ BOOST_AUTO_TEST_CASE() [2/14]

BOOST_AUTO_TEST_CASE ( ExportStrategy_CBlastOptions  )

◆ BOOST_AUTO_TEST_CASE() [3/14]

BOOST_AUTO_TEST_CASE ( ExportStrategy_DBSoftMask  )

◆ BOOST_AUTO_TEST_CASE() [4/14]

BOOST_AUTO_TEST_CASE ( ExportStrategy_FullQuery  )

◆ BOOST_AUTO_TEST_CASE() [5/14]

BOOST_AUTO_TEST_CASE ( ExportStrategy_QueryWithGIs  )

◆ BOOST_AUTO_TEST_CASE() [6/14]

BOOST_AUTO_TEST_CASE ( ExportStrategy_QueryWithLocalIds  )

◆ BOOST_AUTO_TEST_CASE() [7/14]

BOOST_AUTO_TEST_CASE ( ExportStrategy_QueryWithRange  )

◆ BOOST_AUTO_TEST_CASE() [8/14]

BOOST_AUTO_TEST_CASE ( LoadHardMaskDBSearchStrategy  )

◆ BOOST_AUTO_TEST_CASE() [9/14]

BOOST_AUTO_TEST_CASE ( LoadPhiBlastSearchStrategy  )

◆ BOOST_AUTO_TEST_CASE() [10/14]

BOOST_AUTO_TEST_CASE ( LoadWebPsiBlastSearchStrategyAfterRound1  )

◆ BOOST_AUTO_TEST_CASE() [11/14]

BOOST_AUTO_TEST_CASE ( LoadWebPsiBlastSearchStrategyAfterRound2  )

◆ BOOST_AUTO_TEST_CASE() [12/14]

BOOST_AUTO_TEST_CASE ( testBlastnBl2seq  )

◆ BOOST_AUTO_TEST_CASE() [13/14]

BOOST_AUTO_TEST_CASE ( testBlastp  )

◆ BOOST_AUTO_TEST_CASE() [14/14]

BOOST_AUTO_TEST_CASE ( testMegablast  )
Modified on Tue Apr 16 20:09:08 2024 by modify_doxy.py rev. 669887