#include <ncbi_pch.hpp>
#include <corelib/ncbi_limits.h>
#include <algo/winmask/seq_masker_window.hpp>
#include <algo/winmask/seq_masker_window_ambig.hpp>
#include <algo/winmask/seq_masker_window_pattern.hpp>
#include <algo/winmask/seq_masker_window_pattern_ambig.hpp>
#include <algo/winmask/seq_masker_score_mean.hpp>
#include <algo/winmask/seq_masker_score_min.hpp>
#include <algo/winmask/seq_masker_score_mean_glob.hpp>
#include <algo/winmask/seq_masker.hpp>
#include <algo/winmask/seq_masker_util.hpp>
#include <algo/winmask/seq_masker_istat_factory.hpp>
#include <algo/winmask/seq_masker_cache_boost.hpp>
#include <algorithm>
#include <memory>
#include <sstream>

Include dependency graph for seq_masker.cpp:

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Macros
#define	WIN_MASK_ALGO_NAME "window-masker-algorithm"

#define	WIN_MASK_ALGO_VER_MAJOR 1

#define	WIN_MASK_ALGO_VER_MINOR 0

#define	WIN_MASK_ALGO_VER_PATCH 0

Functions
	USING_SCOPE (objects)

Macro Definition Documentation

◆ WIN_MASK_ALGO_NAME

#define WIN_MASK_ALGO_NAME "window-masker-algorithm"

Definition at line 57 of file seq_masker.cpp.

◆ WIN_MASK_ALGO_VER_MAJOR

#define WIN_MASK_ALGO_VER_MAJOR 1

Definition at line 58 of file seq_masker.cpp.

◆ WIN_MASK_ALGO_VER_MINOR

#define WIN_MASK_ALGO_VER_MINOR 0

Definition at line 59 of file seq_masker.cpp.

◆ WIN_MASK_ALGO_VER_PATCH

#define WIN_MASK_ALGO_VER_PATCH 0

Definition at line 60 of file seq_masker.cpp.

Function Documentation

◆ USING_SCOPE()

USING_SCOPE ( objects )

Macros