NCBI C++ ToolKit
Classes | Functions | Variables
seqgraphic_alignment_ds.cpp File Reference
#include <ncbi_pch.hpp>
#include <gui/utils/app_job_dispatcher.hpp>
#include <gui/widgets/seq_graphic/seqgraphic_alignment_ds.hpp>
#include <gui/widgets/seq_graphic/mate_pair_glyph.hpp>
#include <gui/widgets/seq_graphic/alignment_cigar_score.hpp>
#include <gui/widgets/seq_graphic/alignment_quality_score.hpp>
#include <gui/widgets/seq_graphic/alignment_other_score.hpp>
#include <gui/widgets/seq_graphic/sparse_graph.hpp>
#include <gui/widgets/wx/ui_tool_registry.hpp>
#include <objmgr/data_loader.hpp>
#include <objmgr/graph_ci.hpp>
#include <sra/data_loaders/bam/bamloader.hpp>
#include <sra/data_loaders/csra/csraloader.hpp>
#include <util/checksum.hpp>
#include <objmgr/util/sequence.hpp>
#include <gui/widgets/wx/wx_utils.hpp>
+ Include dependency graph for seqgraphic_alignment_ds.cpp:

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Classes

class  CAlnScoringMethodSelector
 

Functions

 USING_SCOPE (objects)
 
string s_fromatstr (Uint8 bytes)
 

Variables

static const int kColorGradNumber = 64
 CSGAlignmentDS. More...
 

Function Documentation

◆ s_fromatstr()

string s_fromatstr ( Uint8  bytes)

Definition at line 171 of file seqgraphic_alignment_ds.cpp.

References _T, int, log, NStr::NumericToString(), suffix, and ToStdString().

Referenced by CSGAlignmentDS::ReleaseMemory().

◆ USING_SCOPE()

USING_SCOPE ( objects  )

Variable Documentation

◆ kColorGradNumber

const int kColorGradNumber = 64
static

CSGAlignmentDS.

number of gradient colors in alignment

Definition at line 59 of file seqgraphic_alignment_ds.cpp.

Referenced by CSGAlignmentDS::InitAlignScoreCache().

Modified on Mon Mar 04 05:13:57 2024 by modify_doxy.py rev. 669887