#include <ncbi_pch.hpp>
#include <corelib/test_boost.hpp>
#include <algo/blast/api/seqinfosrc_seqvec.hpp>
#include <algo/blast/api/seqinfosrc_seqdb.hpp>
#include <algo/blast/api/blast_exception.hpp>
#include <objtools/blast/seqdb_reader/seqdb.hpp>
#include <objects/seqloc/Seq_id.hpp>
#include "test_objmgr.hpp"

Include dependency graph for seqinfosrc_unit_test.cpp:

Go to the SVN repository for this file.

Functions
	USING_SCOPE (objects)

	USING_SCOPE (blast)

	BOOST_AUTO_TEST_CASE (testSeqVecSeqInfoSrc)

	BOOST_AUTO_TEST_CASE (testEmptySeqVec)

	BOOST_AUTO_TEST_CASE (testSeqVecIndexOutOfRange)

	BOOST_AUTO_TEST_CASE (testSeqDbSeqInfoSrc)

	BOOST_AUTO_TEST_CASE (testBadDatabase)

	BOOST_AUTO_TEST_CASE (testSeqDbOidOutOfRange)

Variables
	USING_NCBI_SCOPE

Function Documentation

◆ BOOST_AUTO_TEST_CASE() [1/6]

BOOST_AUTO_TEST_CASE ( testBadDatabase )

Definition at line 114 of file seqinfosrc_unit_test.cpp.

◆ BOOST_AUTO_TEST_CASE() [2/6]

BOOST_AUTO_TEST_CASE ( testEmptySeqVec )

Definition at line 80 of file seqinfosrc_unit_test.cpp.

◆ BOOST_AUTO_TEST_CASE() [3/6]

BOOST_AUTO_TEST_CASE ( testSeqDbOidOutOfRange )

Definition at line 120 of file seqinfosrc_unit_test.cpp.

References CSeqDbSeqInfoSrc::GetLength().

◆ BOOST_AUTO_TEST_CASE() [4/6]

BOOST_AUTO_TEST_CASE ( testSeqDbSeqInfoSrc )

Definition at line 100 of file seqinfosrc_unit_test.cpp.

References CSeqDbSeqInfoSrc::GetId(), CSeqDbSeqInfoSrc::GetLength(), CSeq_id::GetSeqIdString(), and util::strcmp().

◆ BOOST_AUTO_TEST_CASE() [5/6]

BOOST_AUTO_TEST_CASE ( testSeqVecIndexOutOfRange )

Definition at line 86 of file seqinfosrc_unit_test.cpp.

References CSeqVecSeqInfoSrc::GetLength(), and CTestObjMgr::Instance().

◆ BOOST_AUTO_TEST_CASE() [6/6]

BOOST_AUTO_TEST_CASE ( testSeqVecSeqInfoSrc )

Definition at line 52 of file seqinfosrc_unit_test.cpp.

References CSeqVecSeqInfoSrc::GetId(), CSeqVecSeqInfoSrc::GetLength(), CSeq_id::GetSeqIdString(), CTestObjMgr::Instance(), NStr::IntToString(), and util::strcmp().

◆ USING_SCOPE() [1/2]

USING_SCOPE ( blast )

◆ USING_SCOPE() [2/2]

USING_SCOPE ( objects )

Variable Documentation

◆ USING_NCBI_SCOPE

USING_NCBI_SCOPE

Definition at line 46 of file seqinfosrc_unit_test.cpp.

Functions

Variables