#include <ncbiconf.h>#include <complex>#include <iostream>#include <map>#include <vector>#include <fstream>#include <float.h>#include <ctime>#include <stdlib.h>#include <limits>#include <sys/timeb.h>#include <crtdbg.h>#include <corelib/ncbistl.hpp>#include <util/random_gen.hpp>#include <algo/blast/gumbel_params/gumbel_params.hpp>#include "sls_alp_regression.hpp"
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Classes | |
| struct | struct_for_randomization |
| struct | error |
| struct | error_for_single_realization |
| struct | data_for_lambda_equation |
| class | array_positive< T > |
| class | array< T > |
| struct | q_elem |
| class | importance_sampling |
| class | alp_data |
Macros | |
| #define | _CRTDBG_MAP_ALLOC |
Variables | |
| const double | mb_bytes =1048576.0 |
Macro Definition Documentation
◆ _CRTDBG_MAP_ALLOC
| #define _CRTDBG_MAP_ALLOC |
Definition at line 56 of file sls_alp_data.hpp.
Variable Documentation
◆ mb_bytes
| const double mb_bytes =1048576.0 |
Definition at line 71 of file sls_alp_data.hpp.
Referenced by alp::alp(), alp_data::alp_data(), alp_sim::alp_sim(), alp_data::delete_memory_for_matrix(), alp_data::get_memory_for_matrix(), alp_sim::get_minimal_simulation(), alp_sim::get_single_realization(), importance_sampling::importance_sampling(), array_positive< T >::increment_array(), array< T >::increment_array_on_the_left(), array< T >::increment_array_on_the_rigth(), alp::increment_H_matrix(), alp::increment_sequences(), alp::increment_W_matrix(), alp_data::read_RR(), alp::release_and_calculate_memory(), alp::save_state(), alp_data::~alp_data(), alp_sim::~alp_sim(), array< T >::~array(), array_positive< T >::~array_positive(), and importance_sampling::~importance_sampling().
