NCBI C++ ToolKit
Variables
sm_blosum80.c File Reference
#include <util/tables/raw_scoremat.h>
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Variables

static const TNCBIScore s_Blosum80PSM [25 *25]
 Entries for the BLOSUM80 matrix at a scale of ln(2)/2.0. More...
 
const SNCBIPackedScoreMatrix NCBISM_Blosum80
 

Variable Documentation

◆ NCBISM_Blosum80

const SNCBIPackedScoreMatrix NCBISM_Blosum80
Initial value:
= {
"ARNDCQEGHILKMFPSTWYVBJZX*",
-6
}
static const TNCBIScore s_Blosum80PSM[25 *25]
Entries for the BLOSUM80 matrix at a scale of ln(2)/2.0.
Definition: sm_blosum80.c:38

Definition at line 92 of file sm_blosum80.c.

Referenced by CGeneralScoreMatrix::CGeneralScoreMatrix(), ScoreMatrix::initialize(), CMatrixScoringMethod::Load(), NCBISM_GetStandardMatrix(), s_BuiltInSM(), CCmdLineBlastXML2ReportData::x_FillScoreMatrix(), CCmdLineBlastXMLReportData::x_FillScoreMatrix(), CMultiAligner::x_SetScoreMatrix(), and x_SetScoreMatrix().

◆ s_Blosum80PSM

const TNCBIScore s_Blosum80PSM[25 *25]
static

Entries for the BLOSUM80 matrix at a scale of ln(2)/2.0.

Definition at line 38 of file sm_blosum80.c.

Modified on Fri Jan 05 07:25:10 2024 by modify_doxy.py rev. 669887