NCBI C++ ToolKit
Variables
sm_pam250.c File Reference
#include <util/tables/raw_scoremat.h>
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Variables

static const TNCBIScore s_Pam250PSM [25 *25]
 Entries for the PAM250 matrix at a scale of ln(2)/3.0. More...
 
const SNCBIPackedScoreMatrix NCBISM_Pam250
 

Variable Documentation

◆ NCBISM_Pam250

Initial value:
= {
"ARNDCQEGHILKMFPSTWYVBJZX*",
-8
}
static const TNCBIScore s_Pam250PSM[25 *25]
Entries for the PAM250 matrix at a scale of ln(2)/3.0.
Definition: sm_pam250.c:38

Definition at line 92 of file sm_pam250.c.

Referenced by CGeneralScoreMatrix::CGeneralScoreMatrix(), ScoreMatrix::initialize(), CMatrixScoringMethod::Load(), NCBISM_GetStandardMatrix(), s_BuiltInSM(), CCmdLineBlastXML2ReportData::x_FillScoreMatrix(), CCmdLineBlastXMLReportData::x_FillScoreMatrix(), CMultiAligner::x_SetScoreMatrix(), and x_SetScoreMatrix().

◆ s_Pam250PSM

const TNCBIScore s_Pam250PSM[25 *25]
static

Entries for the PAM250 matrix at a scale of ln(2)/3.0.

Definition at line 38 of file sm_pam250.c.

Modified on Sun Feb 25 03:02:38 2024 by modify_doxy.py rev. 669887