sm_pam70.c File Reference

#include <util/tables/raw_scoremat.h>

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Variables
static const TNCBIScore	s_Pam70PSM [25 *25]
	Entries for the PAM70 matrix at a scale of ln(2)/2.0. More...
const SNCBIPackedScoreMatrix	NCBISM_Pam70

Variable Documentation

NCBISM_Pam70

const SNCBIPackedScoreMatrix NCBISM_Pam70

Initial value:

= {
    "ARNDCQEGHILKMFPSTWYVBJZX*",
    s_Pam70PSM,
    -11
}

Definition at line 92 of file sm_pam70.c.

Referenced by CGeneralScoreMatrix::CGeneralScoreMatrix(), ScoreMatrix::initialize(), CMatrixScoringMethod::Load(), NCBISM_GetStandardMatrix(), s_BuiltInSM(), CCmdLineBlastXML2ReportData::x_FillScoreMatrix(), CCmdLineBlastXMLReportData::x_FillScoreMatrix(), CMultiAligner::x_SetScoreMatrix(), and x_SetScoreMatrix().

s_Pam70PSM

const TNCBIScore s_Pam70PSM[25 *25]

static

Entries for the PAM70 matrix at a scale of ln(2)/2.0.

Definition at line 38 of file sm_pam70.c.