NCBI C++ ToolKit
Classes | Macros | Typedefs | Functions
sparse_aln.cpp File Reference
#include <ncbi_pch.hpp>
#include <objtools/alnmgr/sparse_aln.hpp>
#include <objtools/alnmgr/sparse_ci.hpp>
#include <objtools/alnmgr/alnexception.hpp>
#include <objtools/error_codes.hpp>
#include <objmgr/util/sequence.hpp>
#include <objects/seqalign/Sparse_align.hpp>
#include <objects/seqfeat/Genetic_code_table.hpp>
#include <objects/seqfeat/Org_ref.hpp>
+ Include dependency graph for sparse_aln.cpp:

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Classes

struct  SGapRange
 

Macros

#define NCBI_USE_ERRCODE_X   Objtools_Aln_Sparse
 

Typedefs

typedef vector< SGapRangeTGapRanges
 

Functions

 USING_SCOPE (ncbi::objects)
 
CSparseAln::TAlnRngColl::ESearchDirection GetCollectionSearchDirection (CSparseAln::ESearchDirection dir)
 

Macro Definition Documentation

◆ NCBI_USE_ERRCODE_X

#define NCBI_USE_ERRCODE_X   Objtools_Aln_Sparse

Definition at line 45 of file sparse_aln.cpp.

Typedef Documentation

◆ TGapRanges

typedef vector<SGapRange> TGapRanges

Definition at line 96 of file sparse_aln.cpp.

Function Documentation

◆ GetCollectionSearchDirection()

CSparseAln::TAlnRngColl::ESearchDirection GetCollectionSearchDirection ( CSparseAln::ESearchDirection  dir)
inline

◆ USING_SCOPE()

USING_SCOPE ( ncbi::objects  )
Modified on Sat Mar 02 10:54:59 2024 by modify_doxy.py rev. 669887