splign_params.cpp File Reference

#include <ncbi_pch.hpp>
#include <gui/objutils/registry.hpp>
#include <gui/packages/pkg_alignment/splign_params.hpp>

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Variables
static const char *	kcDNA_strandTag = "cDNA strand"
static const char *	kEndGapDetectTag = "EndGap Detection"
static const char *	kMinCompIdentityTag = "Min compartment identity"
static const char *	kMinExonIdentityTag = "Min exon identity"
static const char *	kMaxGenomicExtentTag = "Maximum Genomic Extent"
static const char *	kCompPenaltyTag = "Compartment penalty"
static const char *	kPolyADetectTag = "PolyA Detection"
static const char *	kMaxIntron = "MaxIntron"
static const char *	kDiscType = "DiskType"

Variable Documentation

kcDNA_strandTag

const char* kcDNA_strandTag = "cDNA strand"

static

Definition at line 101 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kCompPenaltyTag

const char * kCompPenaltyTag = "Compartment penalty"

static

Definition at line 106 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kDiscType

const char * kDiscType = "DiskType"

static

Definition at line 109 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kEndGapDetectTag

const char * kEndGapDetectTag = "EndGap Detection"

static

Definition at line 102 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kMaxGenomicExtentTag

const char * kMaxGenomicExtentTag = "Maximum Genomic Extent"

static

Definition at line 105 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kMaxIntron

const char * kMaxIntron = "MaxIntron"

static

Definition at line 108 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kMinCompIdentityTag

const char * kMinCompIdentityTag = "Min compartment identity"

static

Definition at line 103 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kMinExonIdentityTag

const char * kMinExonIdentityTag = "Min exon identity"

static

Definition at line 104 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().

kPolyADetectTag

const char * kPolyADetectTag = "PolyA Detection"

static

Definition at line 107 of file splign_params.cpp.

Referenced by CSplignParams::LoadSettings(), and CSplignParams::SaveSettings().