NCBI C++ ToolKit
Classes | Typedefs | Functions | Variables
src_table_column.hpp File Reference
#include <corelib/ncbistd.hpp>
#include <corelib/ncbistr.hpp>
#include <objects/seq/Seq_descr.hpp>
#include <objects/seq/Seqdesc.hpp>
#include <objects/seqfeat/BioSource.hpp>
#include <objects/seqfeat/SubSource.hpp>
#include <objects/seqfeat/OrgMod.hpp>
#include <objmgr/bioseq_handle.hpp>
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Classes

class  CSrcTableColumnBase
 
class  CSrcTableOrganismNameColumn
 
class  CSrcTableTaxonIdColumn
 
class  CSrcTableGenomeColumn
 
class  CSrcTableSubSourceColumn
 
class  CSrcTableOrgModColumn
 
class  CSrcTableFwdPrimerSeqColumn
 
class  CSrcTableRevPrimerSeqColumn
 
class  CSrcTableFwdPrimerNameColumn
 
class  CSrcTableRevPrimerNameColumn
 
class  CSrcTableColumnBaseFactory
 

Typedefs

typedef vector< CRef< CSrcTableColumnBase > > TSrcTableColumnList
 

Functions

TSrcTableColumnList GetSourceFields (const CBioSource &src)
 

Variables

const string kOrganismName = "Organism Name"
 
const string kTaxId = "Tax ID"
 
const string kPcrForwardName = "fwd-primer-name"
 
const string kPcrForwardSeq = "fwd-primer-seq"
 
const string kPcrReverseName = "rev-primer-name"
 
const string kPcrReverseSeq = "rev-primer-seq"
 

Typedef Documentation

◆ TSrcTableColumnList

Definition at line 204 of file src_table_column.hpp.

Function Documentation

◆ GetSourceFields()

TSrcTableColumnList GetSourceFields ( const CBioSource src)

Variable Documentation

◆ kOrganismName

const string kOrganismName = "Organism Name"

◆ kPcrForwardName

const string kPcrForwardName = "fwd-primer-name"

Definition at line 53 of file src_table_column.hpp.

Referenced by CSrcTableFwdPrimerNameColumn::GetLabel().

◆ kPcrForwardSeq

const string kPcrForwardSeq = "fwd-primer-seq"

Definition at line 54 of file src_table_column.hpp.

Referenced by CSrcTableFwdPrimerSeqColumn::GetLabel().

◆ kPcrReverseName

const string kPcrReverseName = "rev-primer-name"

Definition at line 55 of file src_table_column.hpp.

Referenced by CSrcTableRevPrimerNameColumn::GetLabel().

◆ kPcrReverseSeq

const string kPcrReverseSeq = "rev-primer-seq"

Definition at line 56 of file src_table_column.hpp.

Referenced by CSrcTableRevPrimerSeqColumn::GetLabel().

◆ kTaxId

const string kTaxId = "Tax ID"
Modified on Tue Apr 23 07:40:31 2024 by modify_doxy.py rev. 669887