NCBI C++ ToolKit
Public Attributes | List of all members
BlastInitHitList Struct Reference

Search Toolkit Book for BlastInitHitList

Structure to hold all initial HSPs for a given subject sequence. More...

#include <algo/blast/core/blast_extend.h>

+ Collaboration diagram for BlastInitHitList:

Public Attributes

Int4 total
 Total number of hits currently saved. More...
 
Int4 allocated
 Available size of the offsets array. More...
 
BlastInitHSPinit_hsp_array
 Array of offset pairs, possibly with scores. More...
 
Boolean do_not_reallocate
 Can the init_hsp_array be reallocated? More...
 

Detailed Description

Structure to hold all initial HSPs for a given subject sequence.

Definition at line 158 of file blast_extend.h.

Member Data Documentation

◆ allocated

Int4 BlastInitHitList::allocated

Available size of the offsets array.

Definition at line 160 of file blast_extend.h.

Referenced by BLAST_InitHitListNew(), BLAST_SaveInitialHit(), and BlastInitHitListMove().

◆ do_not_reallocate

Boolean BlastInitHitList::do_not_reallocate

Can the init_hsp_array be reallocated?

Definition at line 163 of file blast_extend.h.

Referenced by BLAST_SaveInitialHit(), and BlastInitHitListMove().

◆ init_hsp_array

BlastInitHSP* BlastInitHitList::init_hsp_array

◆ total

Int4 BlastInitHitList::total

The documentation for this struct was generated from the following file:
Modified on Mon May 20 05:02:23 2024 by modify_doxy.py rev. 669887