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BlastRPSFreqRatiosHeader Struct Reference

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#include <algo/blast/core/blast_rps.h>

Public Attributes

Int4 magic_number
 
Int4 num_profiles
 number of PSSMs in the file More...
 
Int4 start_offsets [1]
 start of an Int4 array that gives the starting byte offset of each RPS DB sequence. More...
 

Detailed Description

Definition at line 85 of file blast_rps.h.

Member Data Documentation

◆ magic_number

Int4 BlastRPSFreqRatiosHeader::magic_number

Definition at line 86 of file blast_rps.h.

Referenced by CRpsFreqRatiosFile::CRpsFreqRatiosFile().

◆ num_profiles

Int4 BlastRPSFreqRatiosHeader::num_profiles

number of PSSMs in the file

Definition at line 87 of file blast_rps.h.

◆ start_offsets

Int4 BlastRPSFreqRatiosHeader::start_offsets[1]

start of an Int4 array that gives the starting byte offset of each RPS DB sequence.

There are num_profiles+1 entries in the list, and the last entry effectively contains the length of all protein sequences combined. Note that the length of each sequence includes one byte at the end for an end-of-sequence sentinel

Definition at line 88 of file blast_rps.h.

Referenced by s_RPSGapAlignDataPrepare().


The documentation for this struct was generated from the following file:
Modified on Sun Apr 14 05:29:37 2024 by modify_doxy.py rev. 669887