Search Toolkit Book for CNWAligner::SAlignInOut
#include <algo/align/nw/nw_aligner.hpp>
Collaboration diagram for CNWAligner::SAlignInOut:
Public Member Functions | |
| SAlignInOut () | |
| SAlignInOut (size_t offset1, size_t len1, bool esfL1, bool esfR1, size_t offset2, size_t len2, bool esfL2, bool esfR2) | |
| size_t | GetSpace (void) const |
| void | FillEdgeGaps (size_t len, bool seq1_gap_fist) |
Static Public Member Functions | |
| static bool | PSpace (const SAlignInOut *p1, const SAlignInOut *p2) |
Public Attributes | |
| size_t | m_offset1 |
| size_t | m_len1 |
| bool | m_esf_L1 |
| bool | m_esf_R1 |
| size_t | m_offset2 |
| size_t | m_len2 |
| bool | m_esf_L2 |
| bool | m_esf_R2 |
| TTranscript | m_transcript |
Private Attributes | |
| size_t | m_space |
Detailed Description
Definition at line 404 of file nw_aligner.hpp.
The documentation for this struct was generated from the following file:
- include/algo/align/nw/nw_aligner.hpp
