GapPrelimEditScript Struct Reference

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A version of GapEditScript used to store initial results from the gapped alignment routines. More...

#include <algo/blast/core/gapinfo.h>

Public Attributes
EGapAlignOpType	op_type
	Type of operation. More...
Int4	num
	Number of operations. More...

Detailed Description

A version of GapEditScript used to store initial results from the gapped alignment routines.

Definition at line 65 of file gapinfo.h.

Member Data Documentation

num

Int4 GapPrelimEditScript::num

Number of operations.

Definition at line 67 of file gapinfo.h.

Referenced by Blast_PrelimEditBlockToGapEditScript(), GapPrelimEditBlockAdd(), GapPrelimEditBlockAppend(), s_BlastGapAlignStruct_Copy(), s_BlastOOFTracebackToGapEditScript(), s_GapPrelimEditBlockAddNew(), and s_GetTraceback().

op_type

EGapAlignOpType GapPrelimEditScript::op_type

Type of operation.

Definition at line 66 of file gapinfo.h.

Referenced by Blast_PrelimEditBlockToGapEditScript(), GapPrelimEditBlockAppend(), s_BlastGapAlignStruct_Copy(), s_BlastOOFTracebackToGapEditScript(), s_GapPrelimEditBlockAddNew(), and s_GetTraceback().

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The documentation for this struct was generated from the following file:

• include/algo/blast/core/gapinfo.h