NCBI C++ ToolKit
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JumperEdit Struct Reference

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Single alignment error. More...

#include "jumper.h"
(Private to src/algo/blast/core.)

Public Attributes

Int4 query_pos
 Query position. More...
Uint1 query_base
 Query base at this position. More...
Uint1 subject_base
 Subject base at this position. More...

Detailed Description

Single alignment error.

Definition at line 86 of file jumper.h.

Member Data Documentation

◆ query_base

Uint1 JumperEdit::query_base

Query base at this position.

Definition at line 89 of file jumper.h.

Referenced by MakeSplicedSeg(), s_ComputeAlignmentScore(), s_ComputeBtopAndIdentity(), s_MergeHSPs(), s_TestHSPRanges(), and s_TrimHSP().

◆ query_pos

Int4 JumperEdit::query_pos

◆ subject_base

Uint1 JumperEdit::subject_base

The documentation for this struct was generated from the following file:
Modified on Sun Apr 21 03:45:03 2024 by rev. 669887