NCBI C++ ToolKit
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Search Toolkit Book for LinkedHSP_BH
linked list of HSPs used to keep best hits for each query. More...
Public Attributes | |
BlastHSP * | hsp |
Int4 | sid |
Int4 | begin |
Int4 | end |
Int4 | len |
struct LinkedHSP_BH * | next |
linked list of HSPs used to keep best hits for each query.
Definition at line 43 of file hspfilter_besthit.c.
Int4 LinkedHSP_BH::begin |
Definition at line 46 of file hspfilter_besthit.c.
Referenced by s_BlastHSPBestHitRun(), s_BlastHSPBestHitRun_RPS(), and s_ImportFromHitlist().
Int4 LinkedHSP_BH::end |
Definition at line 47 of file hspfilter_besthit.c.
Referenced by s_BlastHSPBestHitRun(), and s_BlastHSPBestHitRun_RPS().
BlastHSP* LinkedHSP_BH::hsp |
Definition at line 44 of file hspfilter_besthit.c.
Referenced by s_BlastHSPBestHitRun(), and s_BlastHSPBestHitRun_RPS().
Int4 LinkedHSP_BH::len |
Definition at line 48 of file hspfilter_besthit.c.
Referenced by s_BlastHSPBestHitRun(), and s_BlastHSPBestHitRun_RPS().
struct LinkedHSP_BH* LinkedHSP_BH::next |
Definition at line 49 of file hspfilter_besthit.c.
Referenced by s_BlastHSPBestHitRun(), s_BlastHSPBestHitRun_RPS(), and s_ExportToHitlist().
Int4 LinkedHSP_BH::sid |
Definition at line 45 of file hspfilter_besthit.c.