NCBI C++ ToolKit
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LinkedHSP_BH Struct Reference

Search Toolkit Book for LinkedHSP_BH

linked list of HSPs used to keep best hits for each query. More...

+ Collaboration diagram for LinkedHSP_BH:

Public Attributes

BlastHSPhsp
 
Int4 sid
 
Int4 begin
 
Int4 end
 
Int4 len
 
struct LinkedHSP_BHnext
 

Detailed Description

linked list of HSPs used to keep best hits for each query.

Definition at line 43 of file hspfilter_besthit.c.

Member Data Documentation

◆ begin

Int4 LinkedHSP_BH::begin

◆ end

Int4 LinkedHSP_BH::end

Definition at line 47 of file hspfilter_besthit.c.

Referenced by s_BlastHSPBestHitRun(), and s_BlastHSPBestHitRun_RPS().

◆ hsp

BlastHSP* LinkedHSP_BH::hsp

Definition at line 44 of file hspfilter_besthit.c.

Referenced by s_BlastHSPBestHitRun(), and s_BlastHSPBestHitRun_RPS().

◆ len

Int4 LinkedHSP_BH::len

Definition at line 48 of file hspfilter_besthit.c.

Referenced by s_BlastHSPBestHitRun(), and s_BlastHSPBestHitRun_RPS().

◆ next

struct LinkedHSP_BH* LinkedHSP_BH::next

◆ sid

Int4 LinkedHSP_BH::sid

Definition at line 45 of file hspfilter_besthit.c.


The documentation for this struct was generated from the following file:
Modified on Fri Sep 20 14:57:09 2024 by modify_doxy.py rev. 669887