NCBI C++ ToolKit
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PSIMsa Struct Reference

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Multiple sequence alignment (msa) data structure containing the raw data needed by the PSSM engine to create a PSSM. More...

#include <algo/blast/core/blast_psi.h>

+ Collaboration diagram for PSIMsa:

Public Attributes

PSIMsaDimensionsdimensions
 dimensions of the msa More...
 
PSIMsaCell ** data
 actual data, dimensions are (dimensions->num_seqs+1) by (dimensions->query_length) More...
 

Detailed Description

Multiple sequence alignment (msa) data structure containing the raw data needed by the PSSM engine to create a PSSM.

By convention, the first row of the data field contains the query sequence

Definition at line 75 of file blast_psi.h.

Member Data Documentation

◆ data

PSIMsaCell** PSIMsa::data

◆ dimensions

PSIMsaDimensions* PSIMsa::dimensions

The documentation for this struct was generated from the following file:
Modified on Fri Jun 14 16:52:48 2024 by modify_doxy.py rev. 669887