SFlybaseCompareAlignments Struct Reference

Search Toolkit Book for SFlybaseCompareAlignments

Collaboration diagram for SFlybaseCompareAlignments:

Public Member Functions
	SFlybaseCompareAlignments (CScope &scope)
bool	operator() (const pair< CConstRef< CSeq_align >, string > &p1, const pair< CConstRef< CSeq_align >, string > &p2)

Public Attributes
CScope &	m_Scope

Detailed Description

Definition at line 534 of file gff3flybase_writer.cpp.

Constructor & Destructor Documentation

SFlybaseCompareAlignments()

SFlybaseCompareAlignments::SFlybaseCompareAlignments ( CScope &  scope )

inline

Definition at line 538 of file gff3flybase_writer.cpp.

Member Function Documentation

operator()()

bool SFlybaseCompareAlignments::operator() ( const pair< CConstRef< CSeq_align >, string > &  p1, const pair< CConstRef< CSeq_align >, string > &  p2  )

inline

Definition at line 540 of file gff3flybase_writer.cpp.

References GetAccessionForId(), CSeq_align::GetSeq_id(), CSeq_align::GetSeqStart(), CSeq_align::GetSeqStop(), CSeq_align::GetSeqStrand(), and m_Scope.

Member Data Documentation

m_Scope

CScope& SFlybaseCompareAlignments::m_Scope

Definition at line 536 of file gff3flybase_writer.cpp.

Referenced by operator()().

---

The documentation for this struct was generated from the following file:

• src/objtools/writers/gff3flybase_writer.cpp