SIdAnnotPieces Struct Reference

Search Toolkit Book for SIdAnnotPieces

#include <objmgr/split/annot_piece.hpp>

Collaboration diagram for SIdAnnotPieces:

Public Types
typedef CSeqsRange::TRange	TRange
typedef multiset< SAnnotPiece >	TPieces
typedef TPieces::const_iterator	const_iterator
typedef TPieces::iterator	iterator

Public Member Functions
	SIdAnnotPieces (void)
void	Add (const SAnnotPiece &piece)
void	Remove (const SAnnotPiece &piece)
iterator	Erase (iterator it)
void	clear (void)
bool	empty (void) const
size_t	size (void) const
const_iterator	begin (void) const
const_iterator	end (void) const
iterator	begin (void)
iterator	end (void)

Public Attributes
TPieces	m_Pieces
CSize	m_Size
TRange	m_IdRange

Detailed Description

Definition at line 120 of file annot_piece.hpp.

Member Typedef Documentation

const_iterator

typedef TPieces::const_iterator SIdAnnotPieces::const_iterator

Definition at line 124 of file annot_piece.hpp.

iterator

typedef TPieces::iterator SIdAnnotPieces::iterator

Definition at line 125 of file annot_piece.hpp.

TPieces

typedef multiset<SAnnotPiece> SIdAnnotPieces::TPieces

Definition at line 123 of file annot_piece.hpp.

TRange

typedef CSeqsRange::TRange SIdAnnotPieces::TRange

Definition at line 122 of file annot_piece.hpp.

Constructor & Destructor Documentation

SIdAnnotPieces()

SIdAnnotPieces::SIdAnnotPieces ( void  )

inline

Definition at line 127 of file annot_piece.hpp.

Member Function Documentation

Add()

void SIdAnnotPieces::Add

(

const SAnnotPiece &

piece

)

Definition at line 204 of file annot_piece.cpp.

References multiset< Key, Compare >::insert(), SAnnotPiece::m_IdRange, m_IdRange, m_Pieces, SAnnotPiece::m_Size, and m_Size.

begin() [1/2]

iterator SIdAnnotPieces::begin ( void  )

inline

Definition at line 158 of file annot_piece.hpp.

References multiset< Key, Compare >::begin(), and m_Pieces.

begin() [2/2]

const_iterator SIdAnnotPieces::begin ( void  ) const

inline

Definition at line 150 of file annot_piece.hpp.

References multiset< Key, Compare >::begin(), and m_Pieces.

Referenced by CBlobSplitterImpl::AddToSkeleton(), and CBlobSplitterImpl::SplitPieces().

clear()

void SIdAnnotPieces::clear ( void  )

inline

Definition at line 135 of file annot_piece.hpp.

References multiset< Key, Compare >::clear(), CSize::clear(), COpenRange< TSeqPos >::GetEmpty(), m_IdRange, m_Pieces, and m_Size.

empty()

bool SIdAnnotPieces::empty ( void  ) const

inline

Definition at line 141 of file annot_piece.hpp.

References multiset< Key, Compare >::empty(), and m_Pieces.

Referenced by CBlobSplitterImpl::AddToSkeleton(), and CBlobSplitterImpl::SplitPieces().

end() [1/2]

iterator SIdAnnotPieces::end ( void  )

inline

Definition at line 162 of file annot_piece.hpp.

References multiset< Key, Compare >::end(), and m_Pieces.

end() [2/2]

const_iterator SIdAnnotPieces::end ( void  ) const

inline

Definition at line 154 of file annot_piece.hpp.

References multiset< Key, Compare >::end(), and m_Pieces.

Erase()

SIdAnnotPieces::TPieces::iterator SIdAnnotPieces::Erase

(

TPieces::iterator

it

)

Definition at line 221 of file annot_piece.cpp.

References multiset< Key, Compare >::erase(), m_Pieces, and m_Size.

Remove()

void SIdAnnotPieces::Remove

(

const SAnnotPiece &

piece

)

Definition at line 212 of file annot_piece.cpp.

References _ASSERT, multiset< Key, Compare >::end(), multiset< Key, Compare >::erase(), multiset< Key, Compare >::find(), m_Pieces, SAnnotPiece::m_Size, and m_Size.

size()

size_t SIdAnnotPieces::size ( void  ) const

inline

Definition at line 145 of file annot_piece.hpp.

References m_Pieces, and multiset< Key, Compare >::size().

Member Data Documentation

m_IdRange

TRange SIdAnnotPieces::m_IdRange

Definition at line 169 of file annot_piece.hpp.

Referenced by Add(), clear(), and CBlobSplitterImpl::SplitPieces().

m_Pieces

TPieces SIdAnnotPieces::m_Pieces

Definition at line 167 of file annot_piece.hpp.

Referenced by Add(), begin(), clear(), empty(), end(), Erase(), Remove(), and size().

m_Size

CSize SIdAnnotPieces::m_Size

Definition at line 168 of file annot_piece.hpp.

Referenced by Add(), clear(), Erase(), Remove(), CBlobSplitterImpl::Split(), and CBlobSplitterImpl::SplitPieces().

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The documentation for this struct was generated from the following files:

• include/objmgr/split/annot_piece.hpp
• src/objmgr/split/annot_piece.cpp