Search Toolkit Book for SRelLoc
Location relative to a base Seq-loc: one (usually) or more ranges of offsets. More...
#include <objmgr/util/sequence.hpp>
Collaboration diagram for SRelLoc:
Public Types | |
| enum | EFlags { fNoMerge = 0x1 } |
| typedef int | TFlags |
| binary OR of EFlags More... | |
| typedef CSeq_interval | TRange |
| For relative ranges (ONLY), id is irrelevant and normally unset. More... | |
| typedef vector< CRef< TRange > > | TRanges |
Public Member Functions | |
| SRelLoc (const CSeq_loc &parent, const CSeq_loc &child, CScope *scope=0, TFlags flags=0) | |
| Beware: treats locations corresponding to different sequences as disjoint, even if one is actually a segment of the other. More... | |
| SRelLoc (const CSeq_loc &parent, const TRanges &ranges) | |
| For manual work. As noted above, ranges need not contain any IDs. More... | |
| CRef< CSeq_loc > | Resolve (CScope *scope=0, TFlags flags=0) const |
| CRef< CSeq_loc > | Resolve (const CSeq_loc &new_parent, CScope *scope=0, TFlags flags=0) const |
Public Attributes | |
| CConstRef< CSeq_loc > | m_ParentLoc |
| TRanges | m_Ranges |
Detailed Description
Location relative to a base Seq-loc: one (usually) or more ranges of offsets.
XXX - handle fuzz?
Definition at line 1123 of file sequence.hpp.
The documentation for this struct was generated from the following files:
- include/objmgr/util/sequence.hpp
- src/objmgr/util/sequence.cpp
