SSparseIndex Struct Reference

Search Toolkit Book for SSparseIndex

Collaboration diagram for SSparseIndex:

Public Member Functions
	SSparseIndex (SColumn &column)
void	Add (int index)
void	Optimize (SIntColumn &column, const SIntColumn &backup_column)

Public Attributes
SColumn &	column
CSeqTable_sparse_index::TIndexes *	indexes
int	size

Detailed Description

Definition at line 1392 of file snpread.cpp.

Constructor & Destructor Documentation

SSparseIndex()

SSparseIndex::SSparseIndex ( SColumn &  column )

inline

Definition at line 1398 of file snpread.cpp.

Member Function Documentation

Add()

void SSparseIndex::Add ( int  index )

inline

Definition at line 1405 of file snpread.cpp.

References column, i, indexes, CSeqTable_column_Base::SetSparse(), size, and SColumn::x_GetColumn().

Referenced by SSeqTableContent::Add().

Optimize()

void SSparseIndex::Optimize ( SIntColumn &  column, const SIntColumn &  backup_column  )

inline

Definition at line 1419 of file snpread.cpp.

References _ASSERT, column, i, indexes, CSeqTable_column_Base::ResetSparse(), size, swap(), total_size, SIntColumn::values, and SColumn::x_GetColumn().

Referenced by SSeqTableContent::GetAnnot().

Member Data Documentation

column

SColumn& SSparseIndex::column

Definition at line 1394 of file snpread.cpp.

Referenced by Add(), and Optimize().

indexes

CSeqTable_sparse_index::TIndexes* SSparseIndex::indexes

Definition at line 1395 of file snpread.cpp.

Referenced by Add(), and Optimize().

size

int SSparseIndex::size

Definition at line 1396 of file snpread.cpp.

Referenced by Add(), and Optimize().

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The documentation for this struct was generated from the following file:

• src/sra/readers/sra/snpread.cpp