TransformFunction Struct Reference

Search Toolkit Book for TransformFunction

#include <algo/gnomon/chainer.hpp>

Inheritance diagram for TransformFunction:

Public Member Functions
virtual	~TransformFunction ()
void	operator() (CGeneModel &a)
void	operator() (CAlignModel &a)
virtual void	transform_model (CGeneModel &)
virtual void	transform_align (CAlignModel &a)

Detailed Description

Definition at line 96 of file chainer.hpp.

Constructor & Destructor Documentation

~TransformFunction()

virtual TransformFunction::~TransformFunction ( )

inlinevirtual

Definition at line 97 of file chainer.hpp.

Member Function Documentation

operator()() [1/2]

void TransformFunction::operator() ( CAlignModel &  a )

inline

Definition at line 99 of file chainer.hpp.

References a, and transform_align().

operator()() [2/2]

void TransformFunction::operator() ( CGeneModel &  a )

inline

Definition at line 98 of file chainer.hpp.

References a, and transform_model().

transform_align()

virtual void TransformFunction::transform_align ( CAlignModel &  a )

inlinevirtual

Reimplemented in DoNotBelieveFrameShiftsWithoutCdsEvidence, DoNotBelieveShortPolyATail, TrimAlignment, ProjectCDS, CutShortPartialExons, MarkupTrustedGenes, and MarkupCappedEst.

Definition at line 102 of file chainer.hpp.

References a, and transform_model().

Referenced by operator()().

transform_model()

virtual void TransformFunction::transform_model ( CGeneModel &  )

inlinevirtual

Reimplemented in RemoveTrailingNs.

Definition at line 101 of file chainer.hpp.

Referenced by operator()(), and transform_align().

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The documentation for this struct was generated from the following file:

• include/algo/gnomon/chainer.hpp