symdust.hpp File Reference

#include <corelib/ncbitype.h>
#include <corelib/ncbistr.hpp>
#include <corelib/ncbiobj.hpp>
#include <objects/seqloc/Seq_loc.hpp>
#include <objects/seqloc/Packed_seqint.hpp>
#include <objmgr/seq_vector.hpp>
#include <util/random_gen.hpp>
#include <iostream>
#include <vector>
#include <algorithm>
#include <iterator>
#include <memory>
#include <deque>
#include <list>

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Classes
class	CSymDustMasker
	Looks for low complexity parts of sequences according to the symmetric version of DUST algorithm. More...
struct	CSymDustMasker::CIupac2Ncbi2na_converter
struct	CSymDustMasker::perfect
class	CSymDustMasker::triplets