NCBI C++ ToolKit
Classes | Namespaces | Typedefs | Enumerations | Functions
table2asn_context.hpp File Reference
#include <corelib/ncbistl.hpp>
#include <objtools/edit/gaps_edit.hpp>
#include <misc/discrepancy/discrepancy.hpp>
#include <mutex>
#include <optional>
#include "fileset.hpp"
#include <objects/seq/Seqdesc.hpp>
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Classes

class  TMultiFileSet< _enum, _options >
 
class  CTable2AsnContext
 
struct  CTable2AsnContext::SPrtAlnOptions
 

Namespaces

 objects
 
 objects::edit
 

Typedefs

using CDiagnosticFileSet = TMultiFileSet< eFiles, eFiles::log, eFiles::ecn, eFiles::gbf, eFiles::val, eFiles::dr, eFiles::stats, eFiles::fixedproducts >
 
using CDataFileSet = TMultiFileSet< eFiles, eFiles::asn >
 

Enumerations

enum class  eFiles {
  asn , log , ecn , gbf ,
  val , dr , stats , fixedproducts
}
 

Functions

void g_LoadLinkageEvidence (const string &linkageEvidenceFilename, objects::CGapsEditor::TCountToEvidenceMap &gapsizeToEvidence, objects::ILineErrorListener *pMessageListener)
 
void g_LogDiagMessage (objects::ILineErrorListener *, EDiagSev, const string &msg)
 

Typedef Documentation

◆ CDataFileSet

Definition at line 81 of file table2asn_context.hpp.

◆ CDiagnosticFileSet

Definition at line 70 of file table2asn_context.hpp.

Enumeration Type Documentation

◆ eFiles

enum eFiles
strong
Enumerator
asn 
log 
ecn 
gbf 
val 
dr 
stats 
fixedproducts 

Definition at line 42 of file table2asn_context.hpp.

Function Documentation

◆ g_LoadLinkageEvidence()

void g_LoadLinkageEvidence ( const string linkageEvidenceFilename,
objects::CGapsEditor::TCountToEvidenceMap &  gapsizeToEvidence,
objects::ILineErrorListener *  pMessageListener 
)

◆ g_LogDiagMessage()

void g_LogDiagMessage ( objects::ILineErrorListener *  ,
EDiagSev  ,
const string msg 
)
Modified on Sun Apr 14 05:29:38 2024 by modify_doxy.py rev. 669887