NCBI C++ ToolKit
Functions
thrddgri.c File Reference
#include <algo/structure/threader/thrdatd.h>
#include <algo/structure/threader/thrddecl.h>
+ Include dependency graph for thrddgri.c:

Go to the source code of this file.

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Functions

int g (Seg_Gsm *spe, Seq_Mtf *psm, Thd_Gsm *tdg)
 
float g0 (Seg_Nsm *spn, Thd_Cxe *cxe)
 
float dgri (Seg_Gsm *spe, Seg_Nsm *spn, Thd_Cxe *cxe, Thd_Gsm *tdg, Seq_Mtf *psm, Seg_Cmp *spc)
 

Function Documentation

◆ dgri()

float dgri ( Seg_Gsm spe,
Seg_Nsm spn,
Thd_Cxe cxe,
Thd_Gsm tdg,
Seq_Mtf psm,
Seg_Cmp spc 
)

Definition at line 121 of file thrddgri.c.

References _Thd_Gsm::cs, _Thd_Gsm::dg, _Thd_Gsm::g, g(), _Thd_Gsm::g0, g0(), _Thd_Gsm::ls, _Thd_Gsm::ms, and _Thd_Gsm::ps.

Referenced by atd().

◆ g()

int g ( Seg_Gsm spe,
Seq_Mtf psm,
Thd_Gsm tdg 
)

Definition at line 44 of file thrddgri.c.

References _Seg_Gsm::cs, _Thd_Gsm::cs, _Seg_Gsm::gs, _Seg_Gsm::gss, i, _Seg_Gsm::ls, _Thd_Gsm::ls, _Thd_Gsm::m0, _Seg_Gsm::ms, _Thd_Gsm::ms, _Seg_Gsm::nsc, and _Seq_Mtf::ww0.

Referenced by _sse2neon_vmull_p64(), PeriodicTableClass::AddElement(), CGlModel2D::AddGeomObject(), CWorkerNodeCleanup::AddListener(), CAutoDefModifierCombo::AddSource(), CSplignTrim::AdjustGaps(), algs(), AlignFNog(), CAutoDefModifierCombo::AreFeatureClausesUnique(), BalWFext(), BLAST_Gdb3(), BOOST_AUTO_TEST_CASE(), BvectorBulkSetTest(), bwfi(), CalcMD5(), calcUpAverages(), CAlignModel::CAlignModel(), CWorkerNodeCleanup::CallEventHandlers(), CWorkerNodeJobCleanup::CallEventHandlers(), NTweakExon::CanCreateNonframeshiftingGap(), CDataType::ClassName(), CAlignCollapser::CleanSelfTranscript(), CTable2AsnValidator::Clear(), CTable2AsnValidator::CollectDiscrepancies(), CMsvcPrjFilesCollector::CollectExtra(), CGlState::Color3d(), IRender::Color3d(), CGlState::Color3f(), IRender::Color3f(), CGlState::Color4d(), IRender::Color4d(), CGlRenderDebug::Color4f(), CGlState::Color4f(), IRender::Color4f(), OpenGLRenderer::ConstructLogo(), CreateMimeFromBiostruc(), CRgbaColor::CRgbaColor(), CSeqIdList::CSeqIdList(), SNetServerInPool::DeleteThis(), dgri(), CStrWithURLRenderer::Draw(), CRgbaGradColorTable::FillGradient(), fillTableUp(), FindFGapIntronNog(), FindIGapIntrons(), CCleanup::FixGeneXrefSkew(), FrAlign(), FrAlignFNog1(), SPSG_StatsCounters::SReport::Func(), generate_string_set(), GetAverage(), CBaseCountItem::GetCounts(), CSNPDbSeqIterator::GetCoverageAnnot(), CSNPDbSeqIterator::GetCoverageGraph(), CSNPDbSeqIterator::GetEntry(), CSNPDbSeqIterator::GetOverviewAnnot(), CSNPDbSeqIterator::GetOverviewGraph(), CSNPDbSeqIterator::GetSplitInfoAndVersion(), GL2Matrix(), DeBruijn::HistogramRange(), huft_build(), CValidError_imp::InitializeSourceQualTags(), CGeneModel::InsertTrustedmRNA(), CGeneModel::InsertTrustedProt(), InvertInto(), CCleanup::IsGeneXrefUnnecessary(), CMsvcSite::IsLibOk(), limitedFillTableUp(), makeOLSAveragesTable(), Matrix2GL(), CSimpleRebalanceStrategy::NeedRebalance(), NlmKarlinLambdaNR(), OLSext(), CwxTableListCtrl::OnGetItemAttr(), CSimpleRebalanceStrategy::OnResourceRequested(), CSeqGraphicWidget::OnSetSeqMarkerDlg(), CSeqGraphicWidget::OnSetSeqMarkerForSelDlg(), SNetScheduleAPIImpl::SServerParamsSync::operator()(), CLockerGuard::operator=(), rapidjson::GenericDocument< Encoding, Allocator, StackAllocator >::Populate(), bm::print_svector_stat(), CCommandArgDescriptions::PrintUsageXml(), CTbl2AsnApp::ProcessSingleEntry(), OpenGLRenderer::PushMatrix(), CWorkerNodeCleanup::RemoveListener(), CWorkerNodeCleanup::RemoveListeners(), CAutoDefSourceGroup::RemoveNonMatchingDescriptions(), CThreadedApp::Run(), CDemoApp::Run(), s_AddProjItemToDll(), s_ValidateExon(), CNWAligner::ScoreFromTranscript(), CSplicedAligner16::ScoreFromTranscript(), CSplicedAligner32::ScoreFromTranscript(), CODBC_CursorCmd::SendDataCmd(), CODBC_CursorCmdExpl::SendDataCmd(), CRgbaColor::Set(), CGLCanvas::SetClearColor(), CPhyloNodeData::SetEdgeColorGradient(), CMagicBlastOptionsHandle::SetGapExtensionCost(), CBlastNucleotideOptionsHandle::SetGapOpeningCost(), CBlastOptions::SetGapOpeningCost(), CBlastProteinOptionsHandle::SetGapOpeningCost(), CMagicBlastOptionsHandle::SetGapOpeningCost(), CBlastOptionsLocal::SetGapOpeningCost(), CBlastOptions::SetGapTrigger(), CBlastOptionsHandle::SetGapTrigger(), CBlastOptionsLocal::SetGapTrigger(), CRgbaColor::SetGreen(), CStdCmdLineArgs::SetGzipEnabled(), CGraphTrack::SetLayout(), CStdCmdLineArgs::SetSRAaccessionEnabled(), CAutoDefSourceGroup::SplitGroup(), string_hash_function(), TestCompressSparseGather(), TestCompressSparseSignedVector(), TestCompressSparseVector(), TestSignedSparseSort(), TestSparseSort(), TestStrSparseSort(), CODBC_CursorCmd::UpdateBlob(), CODBC_CursorCmdExpl::UpdateBlob(), CTable2AsnValidator::ValCollect(), CSubSource::ValidateLatLonCountry(), CTable2AsnValidator::ValReportErrors(), CTable2AsnValidator::ValReportErrorStats(), CTable2AsnValidator::ValTotalErrors(), WFext(), CGraphTrack::x_CollectAllGraphs(), x_CollectCoverageGraph(), x_CollectOverviewGraph(), CSGAlignStatJob::x_CreatePileUpGraphs(), SBaseStats::x_finish_add(), CCommandArgDescriptions::x_GetCommandGroupIndex(), CValidErrorFormat::x_GetLocusTag(), CThreadedApp::x_InitializeDelayedStart(), CThreadedApp::x_InitializeThreadGroups(), CID2SNPProcessor_Impl::x_LoadBlob(), CBamRefSeqInfo::x_LoadRangesCov(), CCSRARefSeqInfo::x_LoadRangesStat(), CThreadedApp::x_PrintThreadGroups(), CSplign::x_Run(), CGraphOverlay::x_UpdateLegend(), CHistogramGlyph::x_UpdateLegend(), CBedImportData::xInitializeRgb(), CRgbaColor::YuvToRgb(), and zsc().

◆ g0()

float g0 ( Seg_Nsm spn,
Thd_Cxe cxe 
)
Modified on Wed May 15 15:03:37 2024 by modify_doxy.py rev. 669887