NCBI C++ ToolKit
Functions | Variables
unit_test_orf.cpp File Reference
#include <ncbi_pch.hpp>
#include <corelib/ncbiapp.hpp>
#include <corelib/ncbiargs.hpp>
#include <corelib/ncbienv.hpp>
#include <corelib/test_boost.hpp>
#include <objtools/data_loaders/genbank/gbloader.hpp>
#include <objmgr/object_manager.hpp>
#include <objmgr/scope.hpp>
#include <objmgr/seq_vector.hpp>
#include <objmgr/feat_ci.hpp>
#include <serial/serial.hpp>
#include <serial/objistr.hpp>
#include <serial/objostr.hpp>
#include <objects/seq/Annot_descr.hpp>
#include <objects/seq/Annotdesc.hpp>
#include <objects/seq/Bioseq.hpp>
#include <objects/seqset/Seq_entry.hpp>
#include <objects/seqfeat/Genetic_code_table.hpp>
#include <objects/seqfeat/Org_ref.hpp>
#include <algo/sequence/orf.hpp>
#include <objmgr/util/sequence.hpp>
+ Include dependency graph for unit_test_orf.cpp:

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Functions

 USING_SCOPE (objects)
 
 NCBITEST_AUTO_INIT ()
 
 NCBITEST_INIT_CMDLINE (arg_desc)
 
 BOOST_AUTO_TEST_CASE (TestUsingArg)
 
 BOOST_AUTO_TEST_CASE (tiny_islands)
 
 BOOST_AUTO_TEST_CASE (first_n)
 
 BOOST_AUTO_TEST_CASE (short_n)
 

Variables

 USING_NCBI_SCOPE
 

Function Documentation

◆ BOOST_AUTO_TEST_CASE() [1/4]

BOOST_AUTO_TEST_CASE ( first_n  )

Definition at line 156 of file unit_test_orf.cpp.

References eExtreme_Positional, and COrf::FindOrfs().

◆ BOOST_AUTO_TEST_CASE() [2/4]

BOOST_AUTO_TEST_CASE ( short_n  )

Definition at line 175 of file unit_test_orf.cpp.

References a, eExtreme_Biological, and COrf::FindOrfs().

◆ BOOST_AUTO_TEST_CASE() [3/4]

BOOST_AUTO_TEST_CASE ( TestUsingArg  )

◆ BOOST_AUTO_TEST_CASE() [4/4]

BOOST_AUTO_TEST_CASE ( tiny_islands  )

Definition at line 143 of file unit_test_orf.cpp.

References COrf::FindOrfs().

◆ NCBITEST_AUTO_INIT()

NCBITEST_AUTO_INIT ( )

◆ NCBITEST_INIT_CMDLINE()

NCBITEST_INIT_CMDLINE ( arg_desc  )

◆ USING_SCOPE()

USING_SCOPE ( objects  )

Variable Documentation

◆ USING_NCBI_SCOPE

USING_NCBI_SCOPE

Definition at line 61 of file unit_test_orf.cpp.

Modified on Wed Feb 28 07:13:33 2024 by modify_doxy.py rev. 669887