#include <ncbi_pch.hpp>#include <corelib/ncbistd.hpp>#include <objtools/validator/validerror_desc.hpp>#include <objtools/validator/validerror_descr.hpp>#include <objtools/validator/validerror_annot.hpp>#include <objtools/validator/validerror_bioseq.hpp>#include <objtools/validator/validerror_bioseqset.hpp>#include <objtools/validator/validerror_base.hpp>#include <objmgr/util/sequence.hpp>#include <objects/seqset/Seq_entry.hpp>#include <objects/seqset/Bioseq_set.hpp>#include <objects/misc/sequence_macros.hpp>#include <objmgr/seqdesc_ci.hpp>#include <objmgr/seq_annot_ci.hpp>#include <objtools/validator/validator_context.hpp>
Include dependency graph for validerror_bioseqset.cpp:
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Functions | |
| CConstRef< CUser_object > | s_AutoDefUserObjectFromBioseq (const CBioseq &seq) |
| static bool | x_AlmostEquals (CConstRef< CUser_object > aop1, CConstRef< CUser_object > aop2) |
Function Documentation
◆ s_AutoDefUserObjectFromBioseq()
| CConstRef<CUser_object> s_AutoDefUserObjectFromBioseq | ( | const CBioseq & | seq | ) |
Definition at line 71 of file validerror_bioseqset.cpp.
References CUser_object::eObjectType_AutodefOptions, CSeq_descr_Base::Get(), CBioseq_Base::GetDescr(), CUser_object::GetObjectType(), CBioseq::IsNa(), and CBioseq_Base::IsSetDescr().
Referenced by CValidError_bioseqset::ValidateBioseqSet().
◆ x_AlmostEquals()
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static |
Definition at line 87 of file validerror_bioseqset.cpp.
References CUser_field_Base::GetData(), CUser_object_Base::GetData(), CUser_field_Base::GetLabel(), CObject_id_Base::GetStr(), CUser_field_Base::C_Data::GetStr(), CUser_field_Base::IsSetData(), CUser_object_Base::IsSetData(), CUser_field_Base::IsSetLabel(), CObject_id_Base::IsStr(), and CUser_field_Base::C_Data::IsStr().
Referenced by CValidError_bioseqset::ValidateBioseqSet().
