vcf_heatmap.cpp File Reference

#include <ncbi_pch.hpp>
#include <gui/widgets/seq_graphic/vcf_heatmap.hpp>
#include <gui/widgets/seq_graphic/graph_cache.hpp>
#include <gui/utils/rmtfilestatus.hpp>
#include <gui/utils/url_utils.hpp>
#include <objmgr/scope.hpp>
#include <objects/seq/seq_id_handle.hpp>
#include <util/bitset/bmserial.h>
#include <util/bitset/bmsparsevec_serial.h>
#include <util/checksum.hpp>
#include <corelib/rwstream.hpp>
#include <connect/ncbi_conn_stream.hpp>
#include <corelib/ncbiexec.hpp>

Include dependency graph for vcf_heatmap.cpp:

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Functions
	USING_SCOPE (objects)
void	s_GetData (const string &data_url, const string &chrom, const string &length, vector< TSeqRange > &ranges)

Function Documentation

s_GetData()

void s_GetData	(	const string &	data_url,
		const string &	chrom,
		const string &	length,
		vector< TSeqRange > &	ranges
	)

Definition at line 173 of file vcf_heatmap.cpp.

References CRmtFileStatus::Check(), CDirEntry::CreateTmpFile(), CProcess::eHandle, CExec::eNoWait, CRmtFileStatus::ESuggestedAction_Access, CRmtFileStatus::ESuggestedAction_Skip, CDirEntry::eTmpFileCreate, eUnknown, CRmtScriptTimeout::Get(), CProcess::CExitInfo::GetExitCode(), CExec::CResult::GetProcessHandle(), CDirEntry::GetTmpName(), NCBI_THROW, NULL, NStr::NumericToString(), CRmtFileStatus::Set(), CExec::SpawnL(), and CProcess::Wait().

Referenced by CVcfHeatmap::x_InitData().

USING_SCOPE()

USING_SCOPE

(

objects

)