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Add include_filtered_reads opt, JIRA:SB-3934
Force exit to avoid core dump for error 2na read, JIRA:SB-3713
Replace auto_ptr with unique_ptr. JIRA: CXX-11620, SB-3195
Fix ref seq entry, JIRA:SB-3181
Fix sra entry lookup, JIRA:SB-3179
Add outfmt options, JIRA:SB-3180
Clean up log posts, JIRA:SB-3174
Remove scan db options, JIRA:SB-3174
Add phone home for vdb apps, JIRA:SB-3150
Fix include path, JIRA:WB-4621
Add blast_vdb_cmd, JIRA:WB-4621
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