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Revision 86883 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jul 2 13:06:33 2019 UTC (4 years, 9 months ago) by asztalos
File length: 35875 byte(s)
Diff to previous 70573
fix Completedness-type enum values

Revision 70573 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jan 5 22:21:47 2016 UTC (8 years, 3 months ago) by kans
File length: 35875 byte(s)
Diff to previous 70572
JIRA:SQD-3601 Made addition of tech targeted public

Revision 70572 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jan 5 22:18:40 2016 UTC (8 years, 3 months ago) by kans
File length: 35875 byte(s)
Diff to previous 67150
JIRA:SQD-3601 Added tech targeted

Revision 67150 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Apr 21 18:53:45 2015 UTC (9 years ago) by kans
File length: 35857 byte(s)
Diff to previous 67149
Bump PUBLIC_ASN_SPEC for macro.asn.

Revision 67149 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Apr 21 18:46:27 2015 UTC (9 years ago) by kans
File length: 35857 byte(s)
Diff to previous 65565
Added fatal Boolean to Suspect-rule, cleaned up ASN.1 spec punctuation conventions

Revision 65565 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Dec 11 20:29:44 2014 UTC (9 years, 4 months ago) by kans
File length: 35866 byte(s)
Diff to previous 65492
JIRA:SQD-2113 Added regulatory-class qualifier

Revision 65492 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Dec 8 14:12:49 2014 UTC (9 years, 4 months ago) by bollin
File length: 35838 byte(s)
Diff to previous 59867
JIRA:SQD-2110 added new identifier for regulatory feature

Revision 59867 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Sep 23 19:06:05 2013 UTC (10 years, 7 months ago) by kans
File length: 35729 byte(s)
Diff to previous 59197
JIRA:SQD-1327 Added type-material

Revision 59197 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Aug 2 19:07:33 2013 UTC (10 years, 8 months ago) by bollin
File length: 35703 byte(s)
Diff to previous 58475
JIRA:SQD-1293 added option for macro action "Apply Table"

Revision 58475 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 7 21:17:23 2013 UTC (10 years, 10 months ago) by kans
File length: 35683 byte(s)
Diff to previous 58474
JIRA:SQD-1199 set propset PUBLIC_ASN_SPEC

Revision 58474 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 7 21:15:27 2013 UTC (10 years, 10 months ago) by kans
File length: 35683 byte(s)
Diff to previous 58058
JIRA:SQD-1199 Added macro for adjust-features-for-gaps

Revision 58058 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue May 7 17:08:04 2013 UTC (10 years, 11 months ago) by bollin
File length: 35196 byte(s)
Diff to previous 58041
JIRA:SQD-1130 added macro action for joining short tRNA exons

Revision 58041 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon May 6 17:37:04 2013 UTC (10 years, 11 months ago) by bollin
File length: 35170 byte(s)
Diff to previous 57649
JIRA:SQD-1128 added macro action to replace stop with selenocysteine when product contains "seleno" and codon is TGA.

Revision 57649 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Apr 2 12:15:41 2013 UTC (11 years ago) by bollin
File length: 35135 byte(s)
Diff to previous 57411
JIRA:SQD-1070 added new field to DBLink object

Revision 57411 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Mar 5 20:20:04 2013 UTC (11 years, 1 month ago) by bollin
File length: 35118 byte(s)
Diff to previous 57287
JIRA:SQD-1048 added pcr-conditions qualifier to macro definition

Revision 57287 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Feb 21 17:24:19 2013 UTC (11 years, 2 months ago) by bollin
File length: 35092 byte(s)
Diff to previous 56615
JIRA:SQD-1012 added pub-class as a publication field for macro language

Revision 56615 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Dec 18 15:30:14 2012 UTC (11 years, 4 months ago) by bollin
File length: 35072 byte(s)
Diff to previous 56313
JIRA:SQD-933 added retranslate coding region macro action

Revision 56313 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 19 18:36:44 2012 UTC (11 years, 5 months ago) by bollin
File length: 34963 byte(s)
Diff to previous 56023
JIRA:SQD-886 added macro actions for instantiating protein titles and updating EC numbers

Revision 56023 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 22 12:59:54 2012 UTC (11 years, 6 months ago) by bollin
File length: 34704 byte(s)
Diff to previous 55841
JIRA:SQD-784 altitude is new subsource qualifier

Revision 55841 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Sep 28 14:39:42 2012 UTC (11 years, 6 months ago) by bollin
File length: 34684 byte(s)
Diff to previous 55646
JIRA:SQD-691 added source qualifier type "All Primers"

Revision 55646 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 5 14:17:39 2012 UTC (11 years, 7 months ago) by bollin
File length: 34661 byte(s)
Diff to previous 55635
 Added option to macro action for apply tables for erasing blank values

Revision 55635 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Sep 4 16:56:54 2012 UTC (11 years, 7 months ago) by bollin
File length: 34624 byte(s)
Diff to previous 55598
JIRA:SQD-681 removed unnecessary field from macro swap action

Revision 55598 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Aug 31 14:44:57 2012 UTC (11 years, 7 months ago) by bollin
File length: 34650 byte(s)
Diff to previous 55554
JIRA:SQD-680 Added macro action for trimming terminal Ns from Bioseqs

Revision 55554 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 28 18:22:46 2012 UTC (11 years, 7 months ago) by bollin
File length: 34624 byte(s)
Diff to previous 55504
JIRA:SQD-668 Added PMID as publication field and pub lookup as macro action

Revision 55504 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Aug 24 12:01:52 2012 UTC (11 years, 8 months ago) by bollin
File length: 34588 byte(s)
Diff to previous 55409
 Add option to also update mRNA fields when updating protein name in apply table.

Revision 55409 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Aug 14 18:40:31 2012 UTC (11 years, 8 months ago) by bollin
File length: 34545 byte(s)
Diff to previous 55162
 added macro action for looking up taxonomy

Revision 55162 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jul 23 17:29:01 2012 UTC (11 years, 9 months ago) by bollin
File length: 34520 byte(s)
Diff to previous 54923
JIRA:SQD-608 added new macro command for removing duplicate structured comments

Revision 54923 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jun 21 17:54:02 2012 UTC (11 years, 10 months ago) by bollin
File length: 34473 byte(s)
Diff to previous 54721
JIRA:SQD-541 added new macro action for reordering structured comment fields

Revision 54721 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jun 6 14:39:27 2012 UTC (11 years, 10 months ago) by bollin
File length: 34436 byte(s)
Diff to previous 54598
JIRA:SQD-516 added macro action for auto-applying structured comment prefixes

Revision 54598 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed May 23 19:15:36 2012 UTC (11 years, 11 months ago) by bollin
File length: 34397 byte(s)
Diff to previous 54521
JIRA:WGS-202 Added macro action for propagating missing old-name qualifiers

Revision 54521 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri May 18 11:55:56 2012 UTC (11 years, 11 months ago) by bollin
File length: 34361 byte(s)
Diff to previous 54076
JIRA:SQD-375 additional options for capitalization fixes

Revision 54076 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed May 2 12:33:04 2012 UTC (11 years, 11 months ago) by bollin
File length: 34268 byte(s)
Diff to previous 53954
JIRA:SQD-434 Added macro action to add descriptors from file

Revision 53954 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Apr 27 16:26:15 2012 UTC (12 years ago) by bollin
File length: 33979 byte(s)
Diff to previous 53771
JIRA:SQD-282 extension to allow storing in-memory copies of the table for repeated use of macro

Revision 53771 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Apr 17 12:26:11 2012 UTC (12 years ago) by bollin
File length: 33875 byte(s)
Diff to previous 53765
JIRA:SQD-357 fix to definition for extending features to features

Revision 53765 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Apr 16 17:32:37 2012 UTC (12 years ago) by bollin
File length: 33866 byte(s)
Diff to previous 53696
JIRA:SQD-357 Added action to macro language to extend features to end of feature of other type

Revision 53696 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Apr 11 14:35:43 2012 UTC (12 years ago) by bollin
File length: 33666 byte(s)
Diff to previous 53451
JIRA:SQD-347 added misc-feat option to macro autodef options

Revision 53451 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Mar 19 14:29:01 2012 UTC (12 years, 1 month ago) by bollin
File length: 33450 byte(s)
Diff to previous 53449
JIRA:SQD-250 added option for remove text outside string to not delete string if search text not found.

Revision 53449 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Mar 19 11:55:31 2012 UTC (12 years, 1 month ago) by bollin
File length: 33402 byte(s)
Diff to previous 53308
JIRA:SQD-278 added macro action for removing sequences

Revision 53308 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Mar 7 20:01:37 2012 UTC (12 years, 1 month ago) by bollin
File length: 33241 byte(s)
Diff to previous 53279
JIRA:SQD-271 added matchtype to applytable macro action, added new match type any.

Revision 53279 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Mar 6 17:12:06 2012 UTC (12 years, 1 month ago) by bollin
File length: 32911 byte(s)
Diff to previous 53247
JIRA:SQD-271 added macro language command to apply table

Revision 53247 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Mar 5 15:07:19 2012 UTC (12 years, 1 month ago) by bollin
File length: 32813 byte(s)
Diff to previous 53143
JIRA:SQD-261 added macro action for fixing sets.

Revision 53143 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Feb 27 15:36:35 2012 UTC (12 years, 2 months ago) by bollin
File length: 32663 byte(s)
Diff to previous 53125
JIRA:SQD-252 added macro function for performing autofixes.

Revision 53125 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Feb 24 17:30:08 2012 UTC (12 years, 2 months ago) by bollin
File length: 32569 byte(s)
Diff to previous 52698
JIRA:SQD-250 added macro command for removing text outside string.

Revision 52698 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jan 20 13:20:23 2012 UTC (12 years, 3 months ago) by bollin
File length: 32438 byte(s)
Diff to previous 52656
JIRA:SQD-191 Added "also adjust gene" option to macro action for editing feature location.

Revision 52656 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jan 17 13:27:30 2012 UTC (12 years, 3 months ago) by bollin
File length: 32402 byte(s)
Diff to previous 52584
JIRA:SQD-181 Added new macro action for fixing capitalization in individual author names.

Revision 52584 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jan 10 16:15:52 2012 UTC (12 years, 3 months ago) by bollin
File length: 32316 byte(s)
Diff to previous 51858
JIRA:SQD-172 Added text portion to command for creating TSA IDs.

Revision 51858 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 7 17:58:54 2011 UTC (12 years, 5 months ago) by bollin
File length: 32274 byte(s)
Diff to previous 51424
 Added macro functions for TSA

Revision 51424 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Sep 30 20:00:05 2011 UTC (12 years, 6 months ago) by kans
File length: 32040 byte(s)
Diff to previous 50831
 added two new types to Macro-action-choice

Revision 50831 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Aug 11 15:40:15 2011 UTC (12 years, 8 months ago) by kans
File length: 31978 byte(s)
Diff to previous 50778
JIRA:SF-162 added bio-project to DBLink-field-type

Revision 50778 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Aug 8 16:55:26 2011 UTC (12 years, 8 months ago) by bollin
File length: 31958 byte(s)
Diff to previous 50591
added macro action for updating sequences.

Revision 50591 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jul 26 13:15:22 2011 UTC (12 years, 9 months ago) by bollin
File length: 31806 byte(s)
Diff to previous 50548
Added ability to specify quantity of features of a certain type present to sequence and feature constraint.

Revision 50548 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jul 22 12:04:47 2011 UTC (12 years, 9 months ago) by bollin
File length: 31753 byte(s)
Diff to previous 50532
 Added fix-type category for suspect rules

Revision 50532 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jul 21 13:47:17 2011 UTC (12 years, 9 months ago) by bollin
File length: 31733 byte(s)
Diff to previous 50375
 Add description field for suspect rule

Revision 50375 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jul 12 17:11:09 2011 UTC (12 years, 9 months ago) by bollin
File length: 31694 byte(s)
Diff to previous 50305
minor change to Macro definition to avoid naming conflict

Revision 50305 - (view) (download) (as text) (annotate) - [select for diffs]
Added Tue Jul 5 20:29:59 2011 UTC (12 years, 9 months ago) by ucko
File length: 31691 byte(s)
Add macro.asn, which originated in the C Toolkit, for use by the
next-generation version of Sequin.

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