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Log of /trunk/c++/src/objects/omssa/omssa.asn

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Revision 46575 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jul 21 13:38:58 2010 UTC (13 years, 9 months ago) by lewisg
File length: 24732 byte(s)
Diff to previous 45799 
set public version
Revision 45799 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed May 19 22:28:08 2010 UTC (13 years, 11 months ago) by lewisg
File length: 24732 byte(s)
Diff to previous 45512 
JIRA: OM-51 add semi-chymotrypsin and semi-gluc
Revision 45512 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Apr 22 18:03:09 2010 UTC (14 years ago) by lewisg
File length: 24669 byte(s)
Diff to previous 42649 
negative ion searching
Revision 42649 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jul 29 18:17:58 2009 UTC (14 years, 8 months ago) by lewisg
File length: 24058 byte(s)
Diff to previous 42628 
set revision number
Revision 42628 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jul 28 14:36:03 2009 UTC (14 years, 8 months ago) by lewisg
File length: 24058 byte(s)
Diff to previous 42621 
make public
Revision 42621 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jul 27 17:47:46 2009 UTC (14 years, 8 months ago) by sridharv
File length: 24058 byte(s)
Diff to previous 42310 
JIRA:OM-19 add thermolysin
Revision 42310 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jun 25 14:32:14 2009 UTC (14 years, 9 months ago) by lewisg
File length: 24036 byte(s)
Diff to previous 39636 
JIRA: OM-32 add LysN enzyme
Revision 39636 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Oct 14 13:50:26 2008 UTC (15 years, 6 months ago) by lewisg
File length: 24017 byte(s)
Diff to previous 39628 
set public spec tag to latest version
Revision 39628 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Oct 14 12:22:33 2008 UTC (15 years, 6 months ago) by lewisg
File length: 24017 byte(s)
Diff to previous 38900 
mark as public
Revision 38900 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Aug 8 16:17:07 2008 UTC (15 years, 8 months ago) by lewisg
File length: 24017 byte(s)
Diff to previous 37821 
add bzip2 capability to omssa
Revision 37821 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed May 7 16:53:23 2008 UTC (15 years, 11 months ago) by slottad
File length: 23947 byte(s)
Diff to previous 37813 
Updated public revision number
Revision 37813 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue May 6 21:34:24 2008 UTC (15 years, 11 months ago) by slottad
File length: 23947 byte(s)
Diff to previous 37013 
Added Unimod names
Revision 37013 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Feb 26 22:25:25 2008 UTC (16 years, 1 month ago) by lewisg
File length: 23798 byte(s)
Diff to previous 35566 
add pepxml output and convertor
Revision 35566 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 26 13:28:58 2007 UTC (16 years, 6 months ago) by lewisg
File length: 23747 byte(s)
Diff to previous 35474 
set public tag
Revision 35474 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Sep 18 15:41:36 2007 UTC (16 years, 7 months ago) by lewisg
File length: 23747 byte(s)
Diff to previous 35396 
HexNAcT to lowercase
Revision 35396 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 12 14:15:24 2007 UTC (16 years, 7 months ago) by lewisg
File length: 23747 byte(s)
Diff to previous 34485 
add more mods
Revision 34485 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Jun 29 20:35:09 2007 UTC (16 years, 9 months ago) by lewisg
File length: 22762 byte(s)
Diff to previous 34436 
set public tag
Revision 34436 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 26 20:24:17 2007 UTC (16 years, 9 months ago) by lewisg
File length: 22762 byte(s)
Diff to previous 34257 
mgf file charge support
Revision 34257 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jun 13 21:12:09 2007 UTC (16 years, 10 months ago) by lewisg
File length: 22478 byte(s)
Diff to previous 33327 
add no proline rule, bug fixes
Revision 33327 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Fri Apr 6 15:26:11 2007 UTC (17 years ago) by lewisg
File length: 22135 byte(s)
Diff to previous 33249 
add public tag
Revision 33249 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Apr 2 17:46:33 2007 UTC (17 years ago) by lewisg
File length: 22135 byte(s)
Diff to previous 33188 
lower case mmts
Revision 33188 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Mar 28 20:37:45 2007 UTC (17 years ago) by lewisg
File length: 22135 byte(s)
Diff to previous 32356 
2.0.1 fixes
Revision 32356 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jan 31 22:21:40 2007 UTC (17 years, 2 months ago) by lewisg
File length: 21828 byte(s)
Diff to previous 32084 
library search params
Revision 32084 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jan 17 16:00:32 2007 UTC (17 years, 3 months ago) by gouriano
File length: 18151 byte(s)
Diff to previous 30580 
Set PUBLIC_ASN_SPEC property"
Revision 30580 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Oct 10 21:38:49 2006 UTC (17 years, 6 months ago) by lewisg
File length: 18201 byte(s)
Diff to previous 30175 
take xml spectra input, fix specific fixed mod search
Revision 30175 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Sep 18 21:24:02 2006 UTC (17 years, 7 months ago) by lewisg
File length: 18137 byte(s)
Diff to previous 29949 
new mods, move exception, use max for auto mass adjust
Revision 29949 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Sep 5 18:04:59 2006 UTC (17 years, 7 months ago) by lewisg
File length: 17837 byte(s)
Diff to previous 29676 
auto mass tolerance and get rid of warnings
Revision 29676 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Aug 21 15:18:21 2006 UTC (17 years, 8 months ago) by lewisg
File length: 17641 byte(s)
Diff to previous 25115 
asn.1 changes, bug fixes
Revision 25115 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 7 19:57:20 2005 UTC (18 years, 5 months ago) by lewisg
File length: 15680 byte(s)
Diff to previous 25051 
iterative search
Revision 25051 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Nov 2 21:59:35 2005 UTC (18 years, 5 months ago) by lewisg
File length: 15357 byte(s)
Diff to previous 24945 
add mods, enzymes
Revision 24945 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Oct 27 17:12:04 2005 UTC (18 years, 5 months ago) by lewisg
File length: 15265 byte(s)
Diff to previous 24826 
iterative search, addition to csv output
Revision 24826 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Oct 24 21:46:13 2005 UTC (18 years, 5 months ago) by lewisg
File length: 14554 byte(s)
Diff to previous 24357 
exact mass, peptide size limits, validation, code cleanup
Revision 24357 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 21 18:05:59 2005 UTC (18 years, 7 months ago) by lewisg
File length: 14363 byte(s)
Diff to previous 24245 
speed up non-specific search, add fields to result
Revision 24245 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 14 18:50:56 2005 UTC (18 years, 7 months ago) by lewisg
File length: 14233 byte(s)
Diff to previous 24238 
add theoretical mass to hit
Revision 24238 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 14 15:30:18 2005 UTC (18 years, 7 months ago) by lewisg
File length: 14143 byte(s)
Diff to previous 23778 
neutral loss
Revision 23778 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Aug 15 14:24:56 2005 UTC (18 years, 8 months ago) by lewisg
File length: 13892 byte(s)
Diff to previous 23548 
new mod, enzyme; stat test
Revision 23548 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Aug 1 13:44:18 2005 UTC (18 years, 8 months ago) by lewisg
File length: 13796 byte(s)
Diff to previous 22419 
redo enzyme classes, no-enzyme, fix for fixed mod enumeration
Revision 22419 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu May 19 16:59:17 2005 UTC (18 years, 11 months ago) by lewisg
File length: 13508 byte(s)
Diff to previous 22276 
add top-down searching, fix variable mod bugs
Revision 22276 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu May 12 16:20:41 2005 UTC (18 years, 11 months ago) by lewisg
File length: 13492 byte(s)
Diff to previous 21789 
new search options.  fix scale default
Revision 21789 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Apr 21 21:54:03 2005 UTC (19 years ago) by lewisg
File length: 13176 byte(s)
Diff to previous 20913 
fix Jeri's mem bug, split off mod file, add aspn and gluc
Revision 20913 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Mar 14 22:29:54 2005 UTC (19 years, 1 month ago) by lewisg
File length: 13094 byte(s)
Diff to previous 20026 
add mod file input
Revision 20026 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jan 31 17:30:57 2005 UTC (19 years, 2 months ago) by lewisg
File length: 9230 byte(s)
Diff to previous 19763 
adjustable intensity, z dpendence of precursor mass tolerance
Revision 19763 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jan 11 21:08:43 2005 UTC (19 years, 3 months ago) by lewisg
File length: 8698 byte(s)
Diff to previous 18990 
average mass search
Revision 18990 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 22 23:10:36 2004 UTC (19 years, 5 months ago) by lewisg
File length: 7877 byte(s)
Diff to previous 18665 
add evalue cutoff, fix fixed mods
Revision 18665 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 1 22:04:27 2004 UTC (19 years, 5 months ago) by lewisg
File length: 7838 byte(s)
Diff to previous 18404 
c-term mods
Revision 18404 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Oct 20 22:24:51 2004 UTC (19 years, 6 months ago) by lewisg
File length: 7510 byte(s)
Diff to previous 17931 
neutral mass bugfix, concatenate result and response
Revision 17931 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 29 19:43:52 2004 UTC (19 years, 6 months ago) by lewisg
File length: 7398 byte(s)
Diff to previous 17673 
allow setting of ions
Revision 17673 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Sep 15 18:35:55 2004 UTC (19 years, 7 months ago) by lewisg
File length: 7254 byte(s)
Diff to previous 16787 
cz ions
Revision 16787 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Jul 22 22:22:58 2004 UTC (19 years, 9 months ago) by lewisg
File length: 6678 byte(s)
Diff to previous 16569 
output mods
Revision 16569 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jul 6 22:38:29 2004 UTC (19 years, 9 months ago) by lewisg
File length: 6456 byte(s)
Diff to previous 16379 
tax list input and user settable modmax
Revision 16379 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Jun 23 22:34:36 2004 UTC (19 years, 10 months ago) by lewisg
File length: 5950 byte(s)
Diff to previous 16292 
add multiple enzymes
Revision 16292 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Jun 21 21:19:49 2004 UTC (19 years, 10 months ago) by lewisg
File length: 5930 byte(s)
Diff to previous 16049 
new mods (including n term) and sample perl parser
Revision 16049 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Tue Jun 8 19:46:21 2004 UTC (19 years, 10 months ago) by lewisg
File length: 5628 byte(s)
Diff to previous 15874 
input validation, additional user settable parameters
Revision 15874 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu May 27 21:07:33 2004 UTC (19 years, 10 months ago) by lewisg
File length: 5075 byte(s)
Diff to previous 15873 
tolower first letter in modifications
Revision 15873 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu May 27 20:52:41 2004 UTC (19 years, 10 months ago) by lewisg
File length: 5077 byte(s)
Diff to previous 13927 
better exception checking, use of AutoPtr, command line parsing
Revision 13927 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Mar 1 18:23:19 2004 UTC (20 years, 1 month ago) by lewisg
File length: 4832 byte(s)
Diff to previous 12431 
tweak enumerated INTEGERs and add changes necessary for better mod handling
Revision 12431 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Thu Dec 4 23:39:09 2003 UTC (20 years, 4 months ago) by lewisg
File length: 4676 byte(s)
Diff to previous 12059 
no-overlap hits and various bugfixes
Revision 12059 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Mon Nov 10 22:24:12 2003 UTC (20 years, 5 months ago) by lewisg
File length: 4164 byte(s)
Diff to previous 11819 
allow hitlist size to vary
Revision 11819 - (view) (download) (as text) (annotate) - [select for diffs]
Modified Wed Oct 29 22:22:50 2003 UTC (20 years, 5 months ago) by lewisg
File length: 3873 byte(s)
Diff to previous 11642 
added comments
Revision 11642 - (view) (download) (as text) (annotate) - [select for diffs]
Added Mon Oct 20 21:32:13 2003 UTC (20 years, 6 months ago) by lewisg
File length: 3261 byte(s) 
ommsa toolkit version

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