Parent Directory | Revision Log
Links to HEAD: | (view) (download) (as text) (annotate) |
Sticky Revision: |
Added support for chimeric-specific HGVS delimiter '//'. JIRA:MSS-347
Added exception-code for induced-exon-boundary check. JIRA:VAR-1309
Added exception-code for source-location-overhang. JIRA:VAR-1307
Added VariantPlacement to the export-list.
Added another exception-code. JIRA:VAR-801
Defined more error codes; Allow Bioseq as one of the inst choices. JIRA:SNP-5591
Added ref-same-as-variant and mismatches-in-mapping VariantPlacement exceptions. JIRA:VAR-368
Tests for ambiguous residues in IUPAC-na literals. JIRA:SNP-5387
Added fields for variation-specific and placement-specific SO-terms.
Check Bioseq state in CheckPlacement. JIRA:SNP-5364
Added checks and reporting for inconsistent asserted moltype. JIRA:SNP-4536
Added placement-id fields.
Use pub-set instead of set-of-pub.
Added placement-specific location properties field. JIRA:VAR-43
Added VariantPlacement.frame field. Support indexing of consequence-variations in CVariation. JIRA:SNP-3528
Added user-object to VariantPlacement.
use VariationMethod type for Variation.method field.
Minor bugfixes/typos; added dbxrefs field to VariantPlacement to hold placement-specific rs#.
Tweaked some fields as per dbSNP feedback.
expanded moltypes to support HGVS moltype distinctions.
Added self-indexing of hierarchical variations and fields to capture error states.
Updated the header description.
Removed pub and phenotype Dbtags (redundant with pub and phenotype fields)
made loc-type, id, and placements fields optional.
Remove redundant type
Add new ASN specification for Variation
This form allows you to request diffs between any two revisions of this file. For each of the two "sides" of the diff, enter a numeric revision.
NCBI Systems Team">NCBI Systems Team | ViewVC Help |
Powered by ViewVC 1.1.20 |