2C5D,1RHF


Conserved Protein Domain Family
Ig2_Axl_Tyro3_like

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cd05749: Ig2_Axl_Tyro3_like (this model, PSSM-Id:143226 is obsolete and has been replaced by 409407)
Click on image for an interactive view with Cn3D
Second immunoglobulin (Ig)-like domain of Axl/Tyro3 family receptor tyrosine kinases (RTKs)
Ig2_Tyro3_like: the second immunoglobulin (Ig)-like domain in the Axl/Tyro3 family of receptor tyrosine kinases (RTKs). This family includes Axl (also known as Ark, Ufo, and Tyro7), Tyro3 (also known as Sky, Rse, Brt, Dtk, and Tif), and Mer (also known as Nyk, c-Eyk, and Tyro12). Axl/Tyro3 family receptors have an extracellular portion with two Ig-like domains followed by two fibronectin-types III (FNIII) domains, a membrane-spanning single helix, and a cytoplasmic tyrosine kinase domain. Axl, Tyro3 and Mer are widely expressed in adult tissues, though they show higher expression in the brain, in the lymphatic and vascular systems, and in the testis. Axl, Tyro3, and Mer bind the vitamin K dependent protein Gas6 with high affinity, and in doing so activate their tyrosine kinase activity. Axl/Gas6 signaling may play a part in cell adhesion processes, prevention of apoptosis, and cell proliferation.
Statistics
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PSSM-Id: 143226
Aligned: 7 rows
Threshold Bit Score: 143.382
Created: 27-Sep-2007
Updated: 18-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
 
ligand bindingdimerization
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:2C5D_C, human receptor tyrosine kinase Tyro3 binds its activator Gas6 defined by 3.5A distance.
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                ### #   
2C5D_C       109 FLEEPEDRTVaanTPFNLSCQAQGPPEPVDLLWLQDavplata--pghgpqRSLHVPGlnkTSSFSCEAHNAKGVTTSRT 186  human
1RHF_A       101 FTVEPKDLAVppnAPFQLSCEAVGPPEPVTIVWWRGttkigg----papspSVLNVTGvtqSTXFSCEAHNLKGLASSRT 176  human
NP_990319    189 FIQQPEKLNVtrnSPFNLTCQAVGPPEPVEIYWFRNnvqlnm---kpyispSVLTVPGlneTALFSCEAHNSKGLTASNP 265  chicken
CAG12757     106 FSVEPQHMSVeanVSLSLSCVAHGPPEPVRVIWLQDgaplnaltdpvalspSTLNLTGlnrTSTFSCEAQNHKGVATSAS 185  Tetraodon nigr...
CAM73158     119 FGVEPEDVAAfagESFNLTCAASGPPEPVEVLWWLGgeqngd----ftpspSVLFVKGvneSIKFHCEAKNARGISVSRT 194  zebrafish
NP_001082223 127 FTLEPKDLSVtpnSPFNMTCAAVGPPEPLVIIWWVGdsplgk----sesspSVLQMSGiheRTAFSCEAHNAKGVSSSRT 202  African clawed...
Q12866       199 FTKQPESMNVtrnTAFNLTCQAVGPPEPVNIFWVQNssrvne---qpekspSVLTVPGlteMAVFSCEAHNDKGLTVSKG 275  human
Feature 1            
2C5D_C       187 ATIT 190  human
1RHF_A       177 ATVH 180  human
NP_990319    266 GQVN 269  chicken
CAG12757     186 GTIT 189  Tetraodon nigroviridis
CAM73158     195 GTVH 198  zebrafish
NP_001082223 203 AIVE 206  African clawed frog
Q12866       276 VQIN 279  human

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