Conserved Protein Domain Family
Reelin_repeat_2_subrepeat_2

?
cd10046: Reelin_repeat_2_subrepeat_2 
C-terminal subrepeat of tandem repeat unit 2 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the C-terminal subrepeat, which directly contacts the N-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
?
PSSM-Id: 197354
Aligned: 6 rows
Threshold Bit Score: 250.535
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
reelin repeatreelinEGF domain
Feature 1:reelin repeat interface
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1            # #                                                                  ## # #  
O93574        813 LPSTVMSDFENPDvlk-teWQEIIGGEIVkp-eeGCGVisSGSSLYFNKa-------GKRQLVSWDLDTTwVDFVQFYIQ 883  chicken
CAG08723     1053 LSSSVLSDFESQDall-atWQEVIGGEVVtp-dmGCGVvsSGSSLYFSKvthlpgkaGLRQLMSWDLDTEwAEFVQFYLR 1130 spotted green...
NP_001131084 1068 LPSTIMSDFEGLNgwe-tdWLEVVGGEIVkp-eqGCGIisSGSSMYFYKd-------GRRQLVSLDMDTTwVDFIQFYIQ 1138 western clawe...
P78509       1065 LPSTIMSDFENQNgwe-sdWQEVIGGEIVkp-eqGCGVisSGSSLYFSKa-------GKRQLVSWDLDTSwVDFVQFYIQ 1135 human
XP_002597264  829 LLYAGMYERDLVRyvetqsMQIGTSYMIQfdlvmGCGN--QYNNTIDNRd-------GVRQLVSLDMDTTeVNFIQFYIR 899  Florida lancelet
XP_002120384 1034 LPDFVETSFGNTGsl---eGWKQVGARVV-----GLYS--NVSNVCGPMp-------TLRKLESPDLNVQsGGQIQFYLQ 1096 Ciona intesti...
Feature 1                                                       # ###                             
O93574        884 IGGes-sSCNRPDSREEGVLLQYSNNGGINWQLLaEMYFSDFSKPRFVYLELPAAAKTPCTRFRWWQPVFSGegYDQWAI 962  chicken
CAG08723     1131 VGGdw-aECNQADSREEGVLLQYSNDGGISWGLIaEMYFTDFTKPRFVHYELPLASKTPSTRFRWWQPLHSGegYDQWAI 1209 spotted green...
NP_001131084 1139 IGGet-tSCNKPDSREEGVLLQYSNNGGINWHLLaEMYFSDFIKSKFVYLELPNAARTPCTRFRWWQPVFSGegYDQWAI 1217 western clawe...
P78509       1136 IGGes-aSCNKPDSREEGVLLQYSNNGGIQWHLLaEMYFSDFSKPRFVYLELPAAAKTPCTRFRWWQPVFSGedYDQWAV 1214 human
XP_002597264  900 LGGgdpkECNSPDRREEGVLLQYSNDGGISWELLrELYYADYSSVRFVYVELPPEAMTPITRFRWWQPQHSGhgFDQWAL 979  Florida lancelet
XP_002120384 1097 IGGg---NCNYTLSRTNGVILQYSTNGGATWKFIqEFYYSSYPTPTYINIPIPTTARTHHTRFRWWQPENKGkgEDTWSL 1173 Ciona intesti...
Feature 1            #  
O93574        963 DDIIIL 968  chicken
CAG08723     1210 DDVIIL 1215 spotted green pufferfish
NP_001131084 1218 DDVIIL 1223 western clawed frog
P78509       1215 DDIIIL 1220 human
XP_002597264  980 DGIYIG 985  Florida lancelet
XP_002120384 1174 DDIFIG 1179 Ciona intestinalis

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap