1LI7


Conserved Protein Domain Family
CysS

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COG0215: CysS (this model, PSSM-Id:223293 is obsolete and has been replaced by 439985)
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Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
linked to 3D-structure
Statistics
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PSSM-Id: 223293
Aligned: 67 rows
Threshold Bit Score: 427.8
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LI7_A     1 MLKIFNTLTRQKEEFKPIHAGE-VGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYk-LKYVRNITDIDDKIIKRA 78  Escherichia coli
11387149   1 -MRLLDSVTKEKIKLD----KKdISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGn-rVKFARNYTDIDDKILKKM 74  Campylobacter jejuni
19173375   4 TLKLYNSITRTIDIFTPRKGNE-VKMYICGPTVYDSSHIGHARTYVMFDVIRRVLSDYLKynVRFVMNITDIDDKIIARA 82  Encephalitozoon cun...
2507427    1 -MFIYDTKLKQKVPFEPLV-QNkANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGy-eVMLVRNFTDIDDKIINKA 77  Helicobacter pylori
1351147    1 --MIVDSVSQKPTTLVQKT----INIYLCGPTVYNDLHLGNTRPLIVFDVLNRVLKKAKy-tVNFVQNITDIDDKIIKIA 73  Mycoplasma genitalium
2500964    7 KFTLIDTVSNQSVVLEQKQ----INIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQAAQy-kVQFVQNITDIDDKIIKIA 81  Mycoplasma pneumoniae
1351621   20 ELYVYNTLTHSKVPFVSNGSN--LTWYCCGPTVYDASHMGHARNYVTTDILRRILQSYFGynITFVQNVTDIDDKIILRA 97  fission yeast
13357680   1 -MKLYDSYSNQLVEIN----DElISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKHNi-kTKYVLNITDIDDKIINYA 74  Ureaplasma urealyticum
1730840   35 VLKLYNSLTRSKVEFIPQSGNRgVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGydVQFVQNVTDIDDKIILRA 114 baker's yeast
6831687    1 -MFIYDTKLKQKVPFEPLV-HNkANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGy-eVVLVRNFTDIDDKIINKA 77  Helicobacter pylori...
1LI7_A    79 NENGE--------------------------------------------------------------------------- 83  Escherichia coli
11387149  75 AQSGQ--------------------------------------------------------------------------- 79  Campylobacter jejuni
19173375  83 NETGa--------------------------------------------------------------------------- 87  Encephalitozoon cun...
2507427   78 LKENK--------------------------------------------------------------------------- 82  Helicobacter pylori
1351147   74 QQQEv--------------------------------------------------------------------------- 78  Mycoplasma genitalium
2500964   82 QQQEi--------------------------------------------------------------------------- 86  Mycoplasma pneumoniae
1351621   98 RQQYLfeeykkqqgtnkshsearekvteawfayakknlpeppssmsewpqwlashdiptlainnpklpmhvdalksalda 177 fission yeast
13357680  75 LANNl--------------------------------------------------------------------------- 79  Ureaplasma urealyticum
1730840  115 RQNYLfdnfvkendtkfnatvvdkvktalfqyinknftiqgseiktieefetwlsnadtetl-klenpkfpmhvtavqna 193 baker's yeast
6831687   78 FKENK--------------------------------------------------------------------------- 82  Helicobacter pylori...
1LI7_A    84 ---------------------------------------SFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIEL 124 Escherichia coli
11387149  80 ---------------------------------------TLEEITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDL 120 Campylobacter jejuni
19173375  88 ---------------------------------------SMEEVTRKYTEEFFEDMKTLNVRSPSFVTFVTSYVDKIVKF 128 Encephalitozoon cun...
2507427   83 ---------------------------------------SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGM 123 Helicobacter pylori
1351147   79 ---------------------------------------SESVVTKQQITAYKSLLKKLNILP-IKHIQITEKIDKIPDY 118 Mycoplasma genitalium
2500964   87 ---------------------------------------SEAQLCKQQITAYKSLLKKLNILP-IKHLQVTDKIDKMPGY 126 Mycoplasma pneumoniae
1351621  178 lqvseaseiisldgfwpkvqdvlvplldaelgstvtdpaIFRKLAAYWEDDFNKDMANLNVLPPTAVTRVSEYVPEIVDF 257 fission yeast
13357680  80 ---------------------------------------KELEVSEYYFNEYLKIKKALNTLE-MINPKVSTHMDKIIDY 119 Ureaplasma urealyticum
1730840  194 iesitkgdsmdaevafekvkdvtvplldkelgstisnpeIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDF 273 baker's yeast
6831687   83 ---------------------------------------SIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVRM 123 Helicobacter pylori...
1LI7_A   125 TEQLIAKGHAYVADNGDVMFDVPTDp-----TYGVLSRQ-DLDQLQAGARVDVVDD-----KRNPMDFVLWKMSKEGEPs 193 Escherichia coli
11387149 121 IKKLAKDGFVYTLEDG-IYFDTSKDe-----kYLSLSNR---NLEENISRLSNEVQ-----KRNESDFVLWK-FDENf-- 183 Campylobacter jejuni
19173375 129 IEKLEANGLAYES-RGSVYFDLNSYqq--rySYPLFKSK----D-GINSEGDENKD-----KRSPCDFVLWKRSKENEPr 195 Encephalitozoon cun...
2507427  124 IETLLEKNIAYQVSNGDIYLDTSKDk-----dYGSLSVH---NSSIEFGRIGLVQE-----KRLEQDFVLWKSYKGDNDv 190 Helicobacter pylori
1351147  119 IDQLVNQNHAYVSTQNNVYFAVNSLk-----qYGYLANRmVH-------LEETDTD-----KKNKLDFVLWKITTAG-Ik 180 Mycoplasma genitalium
2500964  127 IARLVKKGFAYVSPLGNTYFSVSQLp-----qYGILANRvVET------IEDEATD-----KRNKLDFVLWKQTTAG-Vk 189 Mycoplasma pneumoniae
1351621  258 VQRIIDRGYAYPVTDGSVYFDTEAFekg-ghFYAKLEPWnKGNRELIAEGEGSLAal--tgKKRPGDFALWKASKPGEPs 334 fission yeast
13357680 120 IQKLIDKQAGYFIGD-DVYFDTKKAl-----nYGQLSKR-DLENDIVGMRIESAAN-----KHNPNDFILWKKTNKG-Im 186 Ureaplasma urealyticum
1730840  274 VQKIIDNGYAYATSDGSVYFDTLKFdkspnhDYAKCQPWnKGQLDLINDGEGSLSNfadngKKSNNDFALWKASKAGEPe 353 baker's yeast
6831687  124 IETLLEKNFAYRVSNGDIYLDTSKDk-----dYGSLSMH---NSSVEFSRIGLVQE-----KRLEQDFVLWKSYKGDNDv 190 Helicobacter pylori...
1LI7_A   194 -WPSPWGAGRPGWHIECSAMNCKQLGNHF-----DIHGGGSDLMFPHHENEIAQSTCAHDGQY-VNYWMHSGMVMVDREK 266 Escherichia coli
11387149 184 -YESEFGKGRPGWHTECVAMIDSIFENTl-----DIHAGGIDLLFPHHENEAAQCRCGCKRKL-ANIWLHNGFVKIDGEK 256 Campylobacter jejuni
19173375 196 -YESKWGHGRPGWHIECSVMSSDILGEDL-----DIHAGGVDLAFPHHENEIAQCQAYFMQEPwVKCFLHTGHLNISGLK 269 Encephalitozoon cun...
2507427  191 gFDSPLGKGRPGWHIECSSMVFETLALTNtpyqiDIHAGGADLLFPHHENEACQTRCAFGVEL-AKYWMHNGFVNINNEK 269 Helicobacter pylori
1351147  181 -WNSKWGLGRPGWHVECAFLIDYCFKNEL-----TIHGGGVDLKFPHHENENALHMALYN-QPiTKHWMHIGHLMIENQK 253 Mycoplasma genitalium
2500964  190 -WNSPWGWGRPGWHVECAFLIDYSFKDQL-----TIHGGGVDLKFPHHENENAMHMALYD-KPlTQHWMHIGHLMFENQK 262 Mycoplasma pneumoniae
1351621  335 -WDSPWSKGRPGWHIECSVMASALLGSNI-----DIHSGGIDLAFPHHDNELAQSEAYFDCPQwVNYFFHAGHLHIEGQK 408 fission yeast
13357680 187 -WNTPWGIGRPGWHSECSCLINTYIGEQV-----SIHGGGIDLKFPHHENENAQNQVLYN-KNlAKVWMHFGLVNINNEK 259 Ureaplasma urealyticum
1730840  354 -WESPWGKGRPGWHIECSVMASDILGSNI-----DIHSGGIDLAFPHHDNELAQSEARFDNQQwINYFLHTGHLHIEGQK 427 baker's yeast
6831687  191 gFDSPLGKGRPGWHIECSSMVFETLALANapyqiDIHAGGTDLLFPHHENEACQTRCAFGVEI-AKYWMHNGFVNINNEK 269 Helicobacter pylori...
1LI7_A   267 MSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTD---KTVAPAG--------- 334 Escherichia coli
11387149 257 MSKSLNNSFFIKDALKEFMGEALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDl--GEISDFDvlnd----- 329 Campylobacter jejuni
19173375 270 MSKSLKNFTTIKEALKTISPRQLRVLFLHHQWNKDMNYEKEHLKFAETIEKKIFNFMSVAEsmrKNALAFEtlenad--- 346 Encephalitozoon cun...
2507427  270 MSKSLGNSFFVKDALKNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVl---GTLGg----------- 335 Helicobacter pylori
1351147  254 MSKSLQNFLLAVDFLNFHDFRVLRWIFYQKHYLHPIDLNQSLIEKANNDIQRIAKTLNVARtwlVYSEQSel-------- 325 Mycoplasma genitalium
2500964  263 MSKSLQNFLLAVDFLTIHDFRILRWLFYQKHYYHPLDLSQSLIEQACSDIKRIQKAVNVCRtwfVYSEQSai-------- 334 Mycoplasma pneumoniae
1351621  409 MSKSLKNFITIKEILKKFTPRQLRLAFLLQQWNTQLDFKETLLAYVLNIEQALENFFRTVR---ALMNETEgvsangghv 485 fission yeast
13357680 260 MSKSLNNFILVKDLLAEYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKnylYFNNQLKsl------- 332 Ureaplasma urealyticum
1730840  428 MSKSLKNFITIQEALKKFSPRQLRLAFASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIR---ALKNDaasaghiskkf 504 baker's yeast
6831687  270 MSKSLGNSFFIKDALKNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVl---GTLGg----------- 335 Helicobacter pylori...
1LI7_A   335 --------------GEAFEARFIEAMDDDFNTPEAYSVLFDMAREV-----NRLKAEDMA--AANAMASHLRKLSAVLGL 393 Escherichia coli
11387149 330 -----------igiKSEIAKQILEILNDDLNVSKALALLDDFISSAn----LELDKESKNkiLKQNIKEALSELAKIFGF 394 Campylobacter jejuni
19173375 347 --------revlreLGNVQEAVHAALLDNVDTPAVMKRIVEMINFTn----ARIKTISPS--TVLVVKDYIKEITDVLG- 411 Encephalitozoon cun...
2507427  336 -------------iNPNFKKEILECMQDDLNVSKALSVLESMLSSTn----EKLDQNPKNkaLKGEILANLKFIEELLGI 398 Helicobacter pylori
1351147  326 ------------isPKQYDP-VFSALLDNLNFANAVAAIWKLIKKIn----TSIKTKDFS--VLREQLSFLEWSIDLLG- 385 Mycoplasma genitalium
2500964  335 ------------paPKQFEP-VFKALLNNLNFANAITHIWKLVKQIn----HDVSKQNLS--GLKEHLSHLEWALNILG- 394 Mycoplasma pneumoniae
1351621  486 pekfdkleiellekFQQTQQNTHLALCDSFNTPLVMQHIDNLVTQAniyirEVGQQPCSR--LLGQIASWITSMLQIFGL 563 fission yeast
13357680 333 ------------tqIDHFEL-FDERINDDLDFVGIVDLIHISVKKIn-----ILIKENKD---MNELKLNLTQLLYMLD- 390 Ureaplasma urealyticum
1730840  505 ----splekelladFVESESKVHSAFCDNLSTPVALKTLSELVTKSntyitTAGAALKIE--PLIAICSYITKILRIIGF 578 baker's yeast
6831687  336 -------------iNPNFKKEILECMQDDLNVSKALSVLESMLSSTn----EKLDQNPKNkaLKGEILANLKFIEELLGI 398 Helicobacter pylori...
1LI7_A   394 leQEPEAFLQSG---AQADDS----------EVAEIEALIQQRLDARKA--------KDWAAADAARDR-LNEMGIVLED 451 Escherichia coli
11387149 395 gfMDATLYFQWG-----VSKE----------EREEIEKLILERTEAKKN--------KDFNTADAIREQ-LNSKKITLLD 450 Campylobacter jejuni
19173375 412 ----LSEEER------QESPG----------EDLIAQLLSNFRESIREMarrkepysKFLEKCDWIRES-IKDYGYIIED 470 Encephalitozoon cun...
2507427  399 gfKDPSAYFQLG-----VSES----------EKQEIENKIEERKRAKER--------KDFLKADSIREE-LLKQKIALMD 454 Helicobacter pylori
1351147  386 ------ISFKSi-------------------HTKLNVRLIKEWSILHKQ--------KAMDKADQIRKK-LIKKMLL--- 428 Mycoplasma genitalium
2500964  395 ------IGFKSi-------------------HTKLNVQLIKKWASLRKN--------GQLDKADEVRQK-LIKKGLL--- 437 Mycoplasma pneumoniae
1351621  564 ---DENGHPNAVgwsSSKGSSsen-----tdAMPYIRAVSSFRDRVRELciakassqEILKACDIFRDYdMAALGVSFND 635 fission yeast
13357680 391 ---ILGINFVDl-------------------HNDENLALLNTWKNYVDK--------KDYVKADELRKQ-LINIGIL--- 436 Ureaplasma urealyticum
1730840  579 ---PSR--PDNLgwaAQAGSNdgslgsledtVMPYVKCLSTFRDDVRSLaikkaepkEFLQLTDKIRNEdLLNLNVALDD 653 baker's yeast
6831687  399 gfKDPSAYFQLG-----VSES----------EKQEIENKIEERKRAKEQ--------KDFLKADSIREE-LLQQKIALMD 454 Helicobacter pylori...
1LI7_A   452 GPQGTTWRRK 461 Escherichia coli
11387149 451 TPNGTIWEKI 460 Campylobacter jejuni
19173375 471 NSEGSILRKK 480 Encephalitozoon cuniculi
2507427  455 TPQGTIWEKF 464 Helicobacter pylori
1351147      ----------     Mycoplasma genitalium
2500964      ----------     Mycoplasma pneumoniae
1351621  636 RPQGSALVKL 645 fission yeast
13357680     ----------     Ureaplasma urealyticum
1730840  654 RNGQSALIKF 663 baker's yeast
6831687  455 TPQGTIWEKL 464 Helicobacter pylori J99
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