Conserved Protein Domain Family
COG1340

?
COG1340: COG1340 (this model, PSSM-Id:224259 is obsolete and has been replaced by 440951)
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
Statistics
?
PSSM-Id: 224259
Aligned: 13 rows
Threshold Bit Score: 151.372
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
18312771   7 LLEKIREVNSQLDEIQrQIDGLTNEINNKRal-----------lDEIRKQIAEVRSLIEGKRNQLQKTRELIGSLVERKS 75  Pyrobaculum aerophilum
11499613   1 -----MMLEKLEERKE-QLEKELQDFIKKR--------------DELNAAAREYANRRDELNKKVREMLAATKEVKAKRD 60  Archaeoglobus fulgidus
14600971   5 SIAEFKKEEEELLKTIeELKEEIVRLKEER--------------RKLINEVKALREERRKASREKREYVEKLRSLREERK 70  Aeropyrum pernix
20089563  11 ATADLSNLNERELKGKvNELRSRIEKSERQlasi------fkelKINRTDIDELKEKRDALNQQVKERVAKAQSLRDQRD 84  Methanosarcina acet...
20093214   1 ------MLKELQKKRS-DLKDISEEAKEKR--------------NTLNAEASALAAKRNDLNKKTKDLINEAQELKVLRD 59  Methanosarcina acet...
20093560   4 SEDKLQKIKELENQLV-KTREELDDLEEKRqeiqrkidqlrsqiHEIRERAEKYRAKRDELNERVRELRERADEHRRRRD 82  Methanopyrus kandle...
15679621 206 ilpiiEKVAEADDKLN---KMSYDEVMELK--------------NEYEDKLSAIASERDELNKKAREMKELRDSLNSELR 268 Methanothermobacter...
14520349   1 ---MQVKVDPEEIKR--IKRELEELHNEKRnie--------lklEELQKELNIWVQKRDEKNLEVKRLREKAREFKAKRD 67  Pyrococcus abyssi
14590077   1 ---MQVKVDPEEIKR--IKRELEELQEEKRkie--------iklEELQKELNTWIQKRDEKNLEVKRLREKAREFKAKRD 67  Pyrococcus horikoshii
15897827   1 MSSISADTDELYKKIS-ELKENIVRLKQLK--------------LELIEKVKKMREKRREKIAKVKELTQQINVVRQEYK 65  Sulfolobus solfatar...
13540910   1 ---MTDLLQEFEEKRD-LLKKAVEEHIKKR--------------DEAAQQSRSYAEQRDQLNAKVHEMREQVKEKISQKN 62  Thermoplasma volcanium
16082450   1 ---MTDLLQEFEEKRD-ILRKAIEEHIKKR--------------DEAAQQSRNYAEQRDQLNAKAHEMRDQVKQKISQKN 62  Thermoplasma acidop...
15789646  12 TADELITDDELQNKSKgQLIKNAGQFRDRR--------------NELNQLASSRASERDDLNAKTREKVDEAQEHREKRD 77  Halobacterium sp. N...
18312771  76 QIINQIRTLRNELLQINITLQKyreKMTIYRNLLSTINEYVgGKPLEKEKLKRIIEQLEYFFETSPTNPEWERQFIKYIS 155 Pyrobaculum aerophilum
11499613  61 ELNAKVKEIRAKRNEIFKEVDA---LYKEVDKLRRSID----KGGRPLGEIEKEIRRLEFKQQTAVLTIEKERALVERIA 133 Archaeoglobus fulgidus
14600971  71 KILDELAQLKEERKKTRDELVIkrdQLRVLRGLLEKEGGR--LAKISLKRLQRRLQELEMMQMTRVLRPEEEKRLVEEIS 148 Aeropyrum pernix
20089563  85 EINKQIGEYKEKRSDVNSKTQE---LFSGIADLKEKRDECNkLSHGSVESLSRAYEAEREAFLNKDLPLAVEIKILQKLK 161 Methanosarcina acet...
20093214  60 EINEKVSEYKNKRDETNARANE---LFAKADSIRKQNN----LGGPSIKALRKDIDRLEFTQQTEVLSTSKERELVGKIT 132 Methanosarcina acet...
20093560  83 ELNEEVQQYKAKRDELNERARE---LAQKAREHVETAKKLRsKVGRPIREIRAEIRRLEREIETNPLSPRREEQIAQRLE 159 Methanopyrus kandle...
15679621 269 ETLNRAVELRDKRNEINSKVEEnkkLRDQINKEIRKLEWS--SGGRDRIKIENEIKRIDKIIETRVLDINKENELVKTAN 346 Methanothermobacter...
14520349  68 EINQRIKELKKNRDEINAKLDL---LYQEALEYRTKRDEFR-QLRRLKMPKEKIEERIEKLEWELQTTPNISPEREKQIV 143 Pyrococcus abyssi
14590077  68 EINQRIKELKKNRDEINAKLDL---LYQEVLEYRTKRDEFK-QLRRLKMPKEKIEERIEKLEWELQTTPNISPEREKQIV 143 Pyrococcus horikoshii
15897827  66 MKLEEFNQLKERRKNLIEIIQQ---IRKDFEEVKKLSS----NNLGNPDSIERKIRELEWKLQTSSLTLEEEKKVIQRIA 138 Sulfolobus solfatar...
13540910  63 ALIEEVQKVRAEKEEHFKKLSD---LRKDYKKLSEESNYTN-ISQREIKAKEKELQKLITKQQTMQLTKAEEDKIVSEIK 138 Thermoplasma volcanium
16082450  63 ALIEEVQKIRTEKEEHFQKLSE---LRKEYKKITEEANYAS-VNQRDIKAKERELQKLIKKQETMQLPKAEEDKVVQEIK 138 Thermoplasma acidop...
15789646  78 ELNERVQEHKEIRNDLNADANE---LFDEVEQRKEDLELD---EGKDLEQLKEEIEELEFKQQTEVLSTEDERELIEKIE 151 Halobacterium sp. N...
18312771 156 Q----IEKELNLADSMEKVKAHIAELKAQIDDFKNKRESIRNEIARLVQDLttvkqelsqlkasrQEIYKELTKLKEKRE 231 Pyrobaculum aerophilum
11499613 134 K----LRKELEERKAQLERHEEFKRLISRIRELKDQARELLNELKAYAEEA--------------DKYHEQLTQMFSEID 195 Archaeoglobus fulgidus
14600971 149 R----LEELIERVRKAKEQALSTMELQAEVKALVIKLKDLNQRIDELRQQA--------------GSVKEELATLSSKIE 210 Aeropyrum pernix
20089563 162 D----LSQRLEAAKKANELHAQIQESYKESKGIHKEGDEFHEKIQKLSDES--------------QACHLEMLENFKAAD 223 Methanosarcina acet...
20093214 133 Q----LQKQYHVKKVQLESNLELKNILDEAQKIRDEASEFHNELAEYARQA--------------QEYHEKMITAFKEAD 194 Methanosarcina acet...
20093560 160 E----LREQLRAWEKANEHSKKADELFSQADELREKASEYHEKVVKTAEEA--------------DKYHQKMIECYERAD 221 Methanopyrus kandle...
15679621 347 E----LRKKLMKIQ----EDDETR---EKALELRKKSEEYHEKVVALSEEA--------------QGYHEKMLEYFRKTD 401 Methanothermobacter...
14520349 144 DqiqvLATELEIIQQIERYNNKLQEVRKKIDQLKKARRAISMEIQQLANQS--------------QQFHEQMIKTYQKAD 209 Pyrococcus abyssi
14590077 144 DqiqvLATELEIIQQIERYNNKLQEVRKKIDQLKKARRAISMEIQQLANQS--------------QQFHEQMIKTYQRAD 209 Pyrococcus horikoshii
15897827 139 E----LEKKLQDAKKIMKIKEKRTEEKAELLAKKVELNTIRERIKTLINEI--------------TEKKNIIKKLVEERN 200 Sulfolobus solfatar...
13540910 139 KlnneIKKMKEDRTKQLNENEKVKELLAEIDKEKTIARDLKKKAEEISNKI--------------SEISNDINKSLQDLD 204 Thermoplasma volcanium
16082450 139 RlsneIKKMKEDREKQLSENEKVKALLAEIDKEKTLARDLKKRAEEISNQI--------------SEISNDINKSLQELD 204 Thermoplasma acidop...
15789646 152 G----KREEYQDREEKLDQSGDLEGLVEEAESVRAEASKHHEKVTELADKA--------------QEHHNQMIEAYREAD 213 Halobacterium sp. N...
18312771 232 ELKKRREELKAEILQLALKRKELREKRRAVQEELEKYNVLLKALELAEKNKARVAARElraaSLKERAEALYNKLLNGER 311 Pyrobaculum aerophilum
11499613 196 EMRKLADEMHEKFIESKKEADRCHNEAIKRRKDIKDLEKVIKALKSKQVKTKEQREKE----ELIRRAKEIYEMFKRGEK 271 Archaeoglobus fulgidus
14600971 211 EYNERIKKLSEEIEKRSTRIDELSKEIDNLYAKYREVMTRLKDIRIAMARGMELSEVE------K-RREEIKKKMEKGEP 283 Aeropyrum pernix
20089563 224 EIRKEANMYHAQLTDKIANINSIKEKIDPLKNSIAGNRKELSLYLDRLKDLQLTKDEH----KVNQKHSDAREKLQKNAR 299 Methanosarcina acet...
20093214 195 RTRAESDIAHREFVKAQEAADEQHKIFINSQKEIRDLDKEIFKLKKKDKDGKSRVVKS----ELQKDAKSIFEKFKGGAK 270 Methanosarcina acet...
20093560 222 KLREKADGYHRKYVEELAKVKPLEDELRELQSELRDLEQKIMEKRAEERALEVRIKDLekqaVDEERLKEIKERLERGEK 301 Methanopyrus kandle...
15679621 402 EIRKKADEAHEKFLEFRRMASEKHEEFKSTLGEIRQINERINALRSENRSARRRESREkd-iEEKERAREIYEKFKEGKK 480 Methanothermobacter...
14520349 210 EVKKEADEYHQKVVELREKIREVRRELREIERKILEYDQKHKELIAYKLVARMRAKRD----VNFEKAVQALEKFKRGEK 285 Pyrococcus abyssi
14590077 210 EVKKEADEYHQKVLELREKIREVRRELREVEKKILEYDQKHKELIAYKLVARMKAKRD----ANFEKAVQALEKFKRGEK 285 Pyrococcus horikoshii
15897827 201 KLRDEINGLNNEIENISKQIEELNVEIKNKSNELNEAQRALKSLQENPVQVNTTEFIE------K-KKKSIEEKLKQNKR 273 Sulfolobus solfatar...
13540910 205 EVRKKADEMHEMAVKYGKESEQEHEAFIQAKNDLRDLEKVIAGLRTKKRATKKKEKDD----ELQQKAEVLFEKFKNGEE 280 Thermoplasma volcanium
16082450 205 EVRKKADEMHEMAIKYGKESEQEHEAFIQAKNDLKDLEKVIAGLRTKKRATKKKEKDD----ELQQKAEVLFEKFKNGEE 280 Thermoplasma acidop...
15789646 214 DIRDEADEMHEDFVEAQEAADAHHEAFVEVQKRLRELDK--Q--EEEEEKDKRAQEQE----EAREEAEEIYERFKEGET 285 Halobacterium sp. N...
18312771 312 LTHEEIKILI-----EAGYL 326 Pyrobaculum aerophilum
11499613 272 IETEDLLILQ-----RAGLI 286 Archaeoglobus fulgidus
14600971 284 LTLEELKLIY------GFYD 297 Aeropyrum pernix
20089563 300 LSLEDLKLLI-----EKGDV 314 Methanosarcina acetivorans C2A
20093214 271 LTTEDLMTLQ-----RSGLV 285 Methanosarcina acetivorans C2A
20093560 302 VSWEELQLLQ-----EYGEM 316 Methanopyrus kandleri AV19
15679621 481 LTKDEILLLQ-----KHRIV 495 Methanothermobacter thermautotrophicus str. Delta H
14520349 286 LTYDEILLLQ-----RYNLV 300 Pyrococcus abyssi
14590077 286 LTWDEILLLQ-----RYNLV 300 Pyrococcus horikoshii
15897827 274 LSFEEFLILYgevdnKDGKD 293 Sulfolobus solfataricus
13540910 281 LTTDDLLILQ-----KAGFL 295 Thermoplasma volcanium
16082450 281 LTTDDLLILQ-----KAGFL 295 Thermoplasma acidophilum
15789646 286 LDTEDLRKLQ-----KSGHL 300 Halobacterium sp. NRC-1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap