Conserved Protein Domain Family
xseA

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PRK00286: xseA (this model, PSSM-Id:234714 is obsolete)
exodeoxyribonuclease VII large subunit; Reviewed
Statistics
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PSSM-Id: 234714
Aligned: 669 rows
Threshold Bit Score: 250.496
Created: 9-Dec-2010
Updated: 17-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15618970    1 MSSPPQAVASLTERIKTLLESN--FCQIIVKGELSNVSLQ-PSGHLYFGIKDS-------QAFLNGAFFHFKSKYY---- 66 
60683219    1 -MQDTLSLYELNALVRRSLEQCl-PDEYWVQAELSDVRTN-STGHCYLEFVQKdprsnnlIAKARGTIWANIYRLLkpyf 77 
53715283    1 -MQDTLSLYELNALVRRSLEQCl-PDEYWVQAELSDVRTN-STGHCYLEFVQKdprsnnlIAKARGTIWANIYRLLkpyf 77 
29349298    1 --mDSLSLLELNALVRRSLEQCl-PDEYWIQAELSDVRSN-TTGHCYLEFVQKdprsnnlVAKARGMIWSNIYRLLkpyf 76 
150002869   1 MEEHPLSLYELNALVKRSIHACl-PDTYWVQAELSDVRSN-YSGHCYLEFVQKeprgnnlIAKARGTIWSNVYRLLkpyf 78 
34540858    1 --mPSYTLTQLASAVRNCLESGf-PGRYWVSAETSGVRVG-ISGHCYLELLDKdtsgsqvTARMKAMIWASDYATLsgrf 76 
294672950   2 NTERHITLFELNRLVREAIEDAlpM-EYWVEAELSECRES--RGHCYMELIQKdeqtatpIAKASAKCWANKWLTIrpyf 78 
302345557   1 -MTKALSLFELNSLVADVIDATl-SRSYWVEAELSEAREN--RGHCYMELIEKnegsnvpIARASAKCWSNIWTLIkpaf 76 
150009300  10 GEKEALSLLELNTRIRGALSRAf-PETCWVRAEMSDVRVNtSSGHCYLEFVEKnaqtgqlVAKVRGSIWAKTFRMLkp-- 86 
121583248  71 PVRNGVSLSSLLGDVSRAVAQAy-KAGVWTLVEVVELRAN--GGHVYLEVSERdah-gavLAKARAVIWQSTASAIlpef 146
15618970   67 -----DRK----PKDGDAVIIHGKLAVYAPRGQYQIVAHALVYAGE-GDLLQKFEETKRRLTAEGYFATEKKKPLPFAPQ 136
60683219   78 eestgQL-----FTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTlGDMARRRREILRQLEEEGVLTLNKELEMPLLPQ 151
53715283   78 eestgQL-----FTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTlGDMARRRREILRQLEEEGVLTLNKELEMPLLPQ 151
29349298   77 eettgQL-----FASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTlGDMARRRREILMQLEEEGVLTLNKELEMPVLPQ 150
150002869  79 eeetgQA-----FVAGIKVMVKVAVEFHELYG-YSLTVQDIDPTYTlGDMARRRREILKQLEEEGVLTLNKELEIPLLAQ 152
34540858   77 qretgET-----FDSGLHVLVLVSVS-YHEQYGLSLRILDIDPSYTmGAMARKRKEIIEELRRQGLYDLNRSLSLPRPTQ 150
294672950  79 -erttGQQ----LHAGMKVLLQVYPQFHEAYG-FSWIVTDIDPTYTlGDMARKRQEIIQKLKAEGVFDLQKELQLPVFCQ 152
302345557  77 -iritGQE----IRAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEYTmGDMMRKRQEIIRQLKAEGVFDLQKELCLPMFAQ 150
150009300  87 ---yfEMEtgqmFASGLKVLVKVSVEFHELYG-LSLTVLDIDPAYTlGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPR 162
121583248 147 -eratGAQ----LAPGIKLLVRARPV-FKAQYGFSLDIDAIDPAYTlGELEARKRDIRTRLQAEGVFAANKNLPPPWDFH 220
15618970  137 CIGVITSPTGAVIQDILRVLSRR-ARn---YKILVYPVTVQGNSAAHEISKAIEVMNA---------EnlaDVLIIARGG 203
60683219  152 RIAVISSATAAGYGDFCHQLQHN-PRgf-yFRTELFPALMQGNQVEESVLAALDAVNAr--------VdefDVVVIIRGG 221
53715283  152 RIAVISSATAAGYGDFCHQLQHN--PrgfyFRTELFPALMQGNQVEESVLAALDAVNArvd--------efDVVVIIRGG 221
29349298  151 RIAVISSATAAGYGDFCHQLQHN-SGgf-fFYTELFPALMQGNQVEESVLAALDRINDr--------VnefDVVVIIRGG 220
150002869 153 RIAVISSATAAGYGDFCNQLEQN-PYgf-vFYPRLFPAIMQGERVEQSVITALDAIHAc--------RddwDVVVIIRGG 222
34540858  151 RIAIVSSGAAAGFEDFIAHLSHS-AEhf-cFYPVLFQAVMQGAQTEASVLGALERIAYh--------RdsfDVVVIIRGG 220
294672950 153 RIAVISSQTAAGYGDFCNQLADN--PygfkFETQLFPAIMQGEGVEQSIISALEQIYDmp----------fDCVVIIRGG 220
302345557 151 RIAVISSETAAGYGDFCNQLETNdYGl--yFHVELFPAIMQGDSVEQSIINALNQINSree--------dfDCVVIIRGG 220
150009300 163 RIAIITSPTAAGYEDFMNQLTRN--KggypFYTKLFPALMQGERTEASVIAALDRIYQhqd--------lfDVVVIIRGG 232
121583248 221 NVLVVSPMGGAGLGDFQAEADRL-QAhg-iCRFTYALSRFQGEGAPAEIRDALQAALGqgtgtvatpF---DAVVIIRGG 295
15618970  204 GSIEDLWAFNEEILVKAIHASTIPIVSAVGHETDYTLCDFASDVRAPTPSAAAEIVCKSSEEQVQVFEGYLRHLLSHSRQ 283
60683219  222 GATSDLSGFDTYLLAAACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHTRVFY 301
53715283  222 GATSDLSGFDTYLLAAACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHTRVFY 301
29349298  221 GATSDLSGFDTYLLAAACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQGAYA 300
150002869 223 GATSDLSGFDTYELAANCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYASAVLHTIST 302
34540858  221 GAVSELAAFDSLAIGQACARFPLPILTGIGHDRDETVVDLVAYRSLKTPTAVADFLVNCQREEWKLIDDLRSRAAEGLRM 300
294672950 221 GATSDMSGFDTLALAENVANFPIPIITGIGHERDESILDMISHTRVKTPTAAAALLIDHLKGVLETIEGAQSMITHYVQQ 300
302345557 221 GATADLSGFDTLNLAENVANFPLPIITGIGHERDESILDMVSFQRMKTPTAAAAYLIDHIASTLMRVENAQAAIIDGVKK 300
150009300 233 GATSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLISRMDSVGEELENLCQDVSLLAMD 312
121583248 296 GAVNDLAWLNDYSLARLVCDLPIPVLTGIGHERDTTLLDEVAHARYDTPSKVIAGIEQRILQRvdevkanfeqvsalaar 375
15618970  284 LLTSKKQQLLPWRRFLd--rA----EFYTTAQQQLDS---------------------IEIAIQKGVQGKIHESKQRYDN 336
60683219  302 RLEQERRRLALLQARI---------------------------------------------------------------- 317
53715283  302 RLEQERRRLALLQARI---------------------------------------------------------------- 317
29349298  301 LLEQEGRRLEMIQTRI---------------------------------------------------------------- 316
150002869 303 RMERENTRLNRMVERI----PmqtrMRLKEEHYRQER---------------------IMKHLEVGLQSRLTKETHCLKM 357
34540858  301 MMMYCHERLIQLSLRTpailK----SSVREEHHRIKS---------------------VEDRIRLAAKQRIAFGLQQLQI 355
294672950 301 KFSIANSQLSIISEAI---------------------------------------------------------------- 316
302345557 301 ALEVEKMRIQHIGSHIp----------------------------------------vLFSVVRTKQDAWLEGLSQRL-- 338
150009300 313 ILSRQKNYLQLVATRF-----------------------------------------------PSIVTSRIERNRSGLQT 345
121583248 376 aSQAAREQAGKLDMTVr--lEal-rHLAQGRQAASQSlaairidamqcmrsaaeqsrdALQAVKTKVLTQLADAKRGVPA 452
15618970  337 ISRWLQgdlvsrmtcrlqslkkmlsqalshkalslqvrchqlkksltyprqiqqasqklspwrqqldtlisrrlhyqkee 416
60683219      --------------------------------------------------------------------------------    
53715283      --------------------------------------------------------------------------------    
29349298      --------------------------------------------------------------------------------    
150002869 358 METRLG-------------------------------------------------------------------------- 363
34540858  356 ASRSL--------------------------------------------------------------------------- 360
294672950     --------------------------------------------------------------------------------    
302345557     --------------------------------------------------------------------------------    
150009300 346 IASGL--------------------------------------------------------------------------- 350
121583248 453 LWSQIAlgsehalrtas--------------------------------------------------------------- 469
15618970  417 yfhkhtrlkhahnvleqqlrshvqklellgrrlSRGCELNLQNQKIAYANVKETLATILERRYENSVARYSALKEQLHSL 496
60683219  318 ---------------------------------PSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELLQNRIADA 364
53715283  318 ---------------------------------PSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELLQNRIADA 364
29349298  317 ---------------------------------PNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELLRQRVADA 363
150002869 364 --------------------------------------------------------IVSQRRLVKEKHRLQLLEQELKAA 387
34540858  361 ---------------------------------PALMKSELKQNTGQLDQVAARLPLLVTANLKNYNRRLETNEQAIRLL 407
294672950 317 ---------------------------------PRLFSIVKTRQEAKIDALYTRLPMLIERRFTSERHRLQLMDEKLKAL 363
302345557 339 ---------------------------------VMRMNEAIKQAEFYLSTLQNCMLLTLQNKLSVEQHRLDILEQRARLL 385
150009300 351 ---------------------------------PAMASGLLSRRQSVLENTELRLRNGITSKLSEDVRFIQLTEQFIKMA 397
121583248 470 -----------------------aegdsfigsvLERARQDASRARQVSSDALNTVSNSAKLLVRKAATDSQALIREIAGQ 526
15618970  497 NPKNVLKRGYAMLFdFNENSAMISVDSLQENARVRIQLQDGEAILTV--T 544
60683219  365 SPQKLLKRGYSITL-KDg-KAVKSAACLQSGDELITRLYEGEVKSRV--E 410
53715283  365 SPQKLLKRGYSITLk--DGKAVKSAACLQPGDELITRLYEGEVKSRV--E 410
29349298  364 SPDKLLSRGYSITL-KDg-KAVTDAASLNPGDQLVTRLAKGSFTSEVrld 411
150002869 388 SPENLLKRGYSITL-KNg-KAVIDASVLQPGDELTTRFAKGEIKSIVtkk 435
34540858  408 HPNATLRRGFAIVL-KDd-KAIRSHSELHKGDHLVAQFADGSVSAVVdqp 455
294672950 364 DPTLLLARGYSITMh--NGRAVKDASQLPPGAEIETRLAKGTIHSVIksV 411
302345557 386 DPSLLLKRGYSITLc--NGRTIRNAKDLKIGDTITTRFETGEVESKV--E 431
150009300 398 SPDYILKRGYSLALk--DGKIIKHASDLRAGEELTTRFIDGEIKSII--K 443
121583248 527 GPEKTLQRGFAIVR-NQSGKPLTRALQARDGAAIEIEFQDGRVAAIT--Q 573
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