1EA6


Conserved Protein Domain Family
MutL_Trans_hPMS_2_like

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cd03484: MutL_Trans_hPMS_2_like 
Click on image for an interactive view with Cn3D
MutL_Trans_hPMS2_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM2 (hPSM2). hPSM2 belongs to the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is homologous to the second domain of the DNA gyrase B subunit, which is known to be important in nucleotide hydrolysis and the transduction of structural signals from ATP-binding site to the DNA breakage/reunion regions of the enzymes. Included in this group are proteins similar to yeast PMS1. The yeast MLH1-PMS1 and the human MLH1-PMS2 heterodimers play a role in meiosis. hMLH1-hPMS2 also participates in the repair of all DNA mismatch repair (MMR) substrates. Cells lacking hPMS2 have a strong mutator phenotype and display microsatellite instability (MSI). Mutation in hPMS2 causes predisposition to HPNCC and Turcot syndrome.
Statistics
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PSSM-Id: 239566
Aligned: 25 rows
Threshold Bit Score: 124.687
Created: 23-Feb-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
ATP binding
Conserved site include 1 residue -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:By similarity to Escherichia coli MutL
  • Comment:conserved Lys residue from the transducer domain interacts with the gamma-phosphate of bound nucleotide.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                      
1EA6_B     222 SIKENIGSVFGqkq-------lqSLIPFVqlppsdsvceey----------------glscsdalhnlfYISGFISQcth 278  human
CAA98478   213 SIQDVVANLFGiarkienskigsGLIPIQqnqpdveimtihs---------------vpmeemhffdlfKIRGFVSSceh 277  nematode
CAG84777   215 TILDNVVNIFGsng-------ayGLIPIDlsvddidvkfrln---------------rgdfpthkklnvQFKGYISNssf 272  Debaryomyces han...
XP_710686   88 TIIDNLISIYGnnn-------nkNLLSLDleit---------------------------------ediKLVGYISSysf 127  Candida albicans...
CAD51007   214 SIKKNFYSIYGkrn-------igNLIEFNidg----------------------------------newNIRGYISDs-- 250  Plasmodium falci...
P54280     212 DMKLNIMNVFGtkv-------ssSLIPWNd--------------------------------------gIIEGYISRphv 246  fission yeast
XP_503794  210 DMIKTVGRVFGnel-------kaHLMDVNfsfdvnytkrgf-----------------lsseelpnyvvRVTGLVSKpvf 265  Yarrowia lipolyt...
XP_626305  249 QIQSELIMTRGkvs------sqkEVAQYIwgksvlgnsldfklegevfvpklqnmdskiqdeslvggkwIISGFISSl-- 320  Cryptosporidium ...
EAL45250   204 SLKENLYNFFKgda-------kdVTIPIEfee----------------------------------qgiKISGIVSNf-t 241  Entamoeba histol...
EAN31236   212 NVRGVIEEIFGhef-------akKLVQINikd----------------------------------kewRIEGLVSNp-- 248  Theileria parva
Feature 1                                                                        #             
1EA6_B     279 GVGRSSTDRQFFFINRRPCDp-AKVCRLVNEVYHmyn----rhQYPFVVLNISVDSecVDINVTPDKRQILLq--eEKLL 351  human
CAA98478   278 GCGRGTSDRQFVYINNRPVEy-SRVCSVINDVYKqfn----kkQYPIIVLFIDVPPekIDVNVTPDKKTVMLe--kERHL 350  nematode
CAG84777   273 GLGRSSGDRQYLFINGRPIIf-KKFLKTINEVYKsfn----hvQFPVVILNVIIDTefLDINVTPDKRVIMIq--nEDLI 345  Debaryomyces han...
XP_710686  128 GLGRSAPDRQFLYLNKRPIVf-KKLYKLINEIYKsyn----hvQYPIYIIDIVINPnlVDINLLPDKTNVLIk--dETTI 200  Candida albicans...
CAD51007   251 NSGRRDKDLQFYYINSRPIHilKNVNKLINTIYRefn----srLYPIIICNILSDTknIDINVTPDKREVFFt--fEQEM 324  Plasmodium falci...
P54280     247 GSTRASNERQMLFINRRLVNl-PKIARVIQEVFKpys----maQSPFFAINLRITNgtIDINVSPDKKSVFLs--eEDSI 319  fission yeast
XP_503794  266 GMGRNANDKQLLFINKRPFTm-KKLQKVFQDVYTsfv----hlQKPVLIINLDIPPsaYDVNVSPDKRTIMLh--nEVDV 338  Yarrowia lipolyt...
XP_626305  321 DKGRPSPDHQIFTVNNRPVDpiKRISRVISSIHStlssfnnrkLYPAFVINIHLPQslLDINVTPNKRIVMLpakvETVL 400  Cryptosporidium ...
EAL45250   242 DKGRTNSDRIFLFVNKRPIEh-KKLQQIITQQWRslgv-sfkrKYPTVILNISVAE--YDPNVSPDKRKVFFl--dEDNV 315  Entamoeba histol...
EAN31236   249 YNERGYREMEYFYINKRPISkvQKFKNAISAIFShfs----skSKPSFILNLTMNYdhIDVNISPDKRSAYIy--sEDYI 322  Theileria parva
Feature 1                   
1EA6_B     352 LAVLKTSLIGMFD 364  human
CAA98478   351 LAVVRASMMKTYL 363  nematode
CAG84777   346 NDILRNEVTKFFD 358  Debaryomyces hansenii CBS767
XP_710686  201 LQTIETKLSEFFE 213  Candida albicans SC5314
CAD51007   325 CEHMKTALVKLFT 337  Plasmodium falciparum 3D7
P54280     320 IEFIKNSLQNLCE 332  fission yeast
XP_503794  339 INCIRENLVDVFE 351  Yarrowia lipolytica CLIB122
XP_626305  401 AENIQQFLQDSYQ 413  Cryptosporidium parvum Iowa II
EAL45250   316 ITLMEKCISSVWS 328  Entamoeba histolytica HM-1:IMSS
EAN31236   323 IRTFKVSFYAILL 335  Theileria parva

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