Conserved Protein Domain Family
FERM_C_FRMD3_FRMD5

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cd13192: FERM_C_FRMD3_FRMD5 
FERM domain C-lobe of FERM domain-containing protein 3 and 5 (FRMD3 and 5)
FRMD3 (also called Band 4.1-like protein 4O/4.1O though it is not a true member of that family) is a novel putative tumor suppressor gene that is implicated in the origin and progression of lung cancer. In humans there are 5 isoforms that are produced by alternative splicing. Less is known about FRMD5, though there are 2 isoforms of the human protein are produced by alternative splicing. Both FRMD3 and FRMD5 contain a N-terminal FERM domain, followed by a FERM adjacent (FA) domain, and 4.1 protein C-terminal domain (CTD). The FERM domain has a cloverleaf tripart structure composed of: (1) FERM_N (A-lobe or F1); (2) FERM_M (B-lobe, or F2); and (3) FERM_C (C-lobe or F3). The C-lobe/F3 within the FERM domain is part of the PH domain family. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAK and JAK, in addition to other proteins involved in signaling. This domain is structurally similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Statistics
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PSSM-Id: 270013
Aligned: 9 rows
Threshold Bit Score: 188.756
Created: 6-Dec-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative actinputativeputative
Feature 1:putative actin binding site 2 [polypeptide binding site]
Evidence:
  • Comment:ERM and merlin proteins might utilize interaction of the second masking motif with the FERM domain to compete with and suppress the binding of this region to actin

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
Q0P4Q4       205 SEFNLLLKAHSLETYGVDPHPCKDsTGTTTFLGYTAAGFVVFQGNKRIHLIKWPDICKMKFDGKTFHVVVMqk------- 277 western clawed ...
XP_003741129 201 AQDFFLKRAATLESYGIDPHPVKDeHNTQLYIGVNYLGVMTFRAGKRDLHIRFDDLVKFNYEGKMFILHVMtag------ 274 western predato...
NP_609384    186 AMDEFLGIARGLETYGIDPHPVKDhRGSQQYVGINNTGISTFVAGKRSQHFRWNEIHKINFEGKMFIAHLSytdas---- 261 fruit fly
EFX75742     190 AVNAFLKKAATLDTYGVDPHPVKDpRGARLYIGTNHSGVATFYNGRRTHHFRWIDISKLNYEGKMFIIHLIimeda---- 265 common water flea
XP_002735565 198 AEENFLRKARTLETYGVDPHSVKDiYGSQLHLGFTHEGLSVFQGSKRIQLFRWHDIGKFGYEGKTFFIHAMvn------- 270 Saccoglossus ko...
XP_413944    191 SELNFLRKAQTLETYGVDPHPCKDvSGNAAFLAFTPFGFVVLQGNKRVHFIKWNEVTKMKFEGKTFYLYVSqke------ 264 chicken
BAC03480     176 SELNFLRKAQTLETYGVDPHPCKDvSGNAAFLAFTPFGFVVLQGNKRVHFIKWNEVTKLKFEGKTFYLYVSqke------ 249 human
XP_002404142 189 AETNFLRKACLLETYGVDPHPVKDhKGNQLYLGINHAGILTFQGSRKTHHFKWPDIQKINYEGKMFILHLMfpeaegvke 268 black-legged tick
XP_001626491 188 AEKNFLDKVKSLDMYGVDPHPCKDqDNVQLYLGLTPTGIAIIRDGKKVSGFEWAQIIKCSYEGKVFYVQVHkd------- 260 starlet sea ane...
Feature 1                               ############
Q0P4Q4       278 ----ekKNILTYHTSTPAACKHLWKCGVENQAFYK 308 western clawed frog
XP_003741129 275 ---snrKQVIGFRCPTQAACQYLFACANEIRCFYT 306 western predatory mite
NP_609384    262 --repkKHTVGFKCPTGAACRYLWRCAIEQMLFFT 294 fruit fly
EFX75742     266 --rtkkKHTVGFKCATSSACRHLWRYSVEQRIFFT 298 common water flea
XP_002735565 271 ----qrKLTHAYKSATTSASKHIWKCGLEHQAFFK 301 Saccoglossus kowalevskii
XP_413944    265 ----ekKIVLTYFAPTPEACKHLWKCGIENQAFYK 295 chicken
BAC03480     250 ----ekKIILTYFAPTPEACKHLWKCGIENQAFYK 280 human
XP_002404142 269 lvpfqkKHLMGFKCPTQTACHHLWRCAVEQRYFFT 303 black-legged tick
XP_001626491 261 ----drKANYGFRLPDPLACKHLWKCAVEHHAFYR 291 starlet sea anemone

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