2JY6,1VEJ,2DAH,2DNA,2JY5,2KNZ


Conserved Protein Domain Family
UBA_PLICs

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cd14399: UBA_PLICs 
Click on image for an interactive view with Cn3D
UBA domain of eukaryotic protein linking integrin-associated protein (IAP, also known as CD47) with cytoskeleton (PLIC) proteins
The PLIC proteins (or ubiquilins) family contains human homologs of the yeast ubiquitin-like Dsk2 protein, PLIC-1 (also called ubiquilin-1), PLIC-2 (also called ubiquilin-2 or Chap1), PLIC-3 (also called ubiquilin-3) and PLIC-4 (also called ubiquilin-4, Ataxin-1 interacting ubiquitin-like protein, A1Up, Connexin43-interacting protein of 75 kDa, or CIP75), and mouse PLIC proteins. They are ubiquitin-binding adaptor proteins involved in all protein degradation pathways through delivering ubiquitinated substrates to proteasomes. They also promote autophagy-dependent cell survival during nutrient starvation. PLIC-1 regulates the function of the thrombospondin receptor CD47 and G protein signaling. It plays a role in TLR4-mediated signaling through interacting with the Toll/interleukin-1 receptor (TIR) domain of TLR4. It also inhibits the TLR3-Trif antiviral pathway by reducing the abundance of Trif. Moreover, PLIC-1 binds to gamma-aminobutyric acid receptors (GABAARs) and modulates the ubiquitin-dependent, proteasomal degradation of GABAARs. Furthermore, PLIC-1 acts as a molecular chaperone regulating amyloid precursor protein (APP) biosynthesis, trafficking, and degradation by stimulating K63-linked polyubiquitination of lysine 688 in the APP intracellular domain. In addition, PLIC-1 is involved in the protein aggregation-stress pathway via associating with the ubiquitin-interacting motif (UIM) proteins ataxin 3, HSJ1a, and epidermal growth factor substrate 15 (EPS15). PLIC-2 is a protein that binds the ATPase domain of the HSP70-like Stch protein. It functions as a negative regulator of G protein-coupled receptor (GPCR) endocytosis. It also involved in amyotrophic lateral sclerosis (ALS)-related dementia. PLIC-3 is encoded by UBQLN3, a testis-specific gene. It shows high sequence similarity with the Xenopus protein XDRP1, a nuclear phosphoprotein that binds to the N-terminus of cyclin A and inhibits Ca2+-induced degradation of cyclin A, but not cyclin B. PLIC-4 is a ubiquitin-like nuclear protein that interacts with ataxin-1 and further links ataxin-1 with the chaperone and ubiquitin-proteasome pathways. It also binds to the non-ubiquitinated gap junction protein connexin43 (Cx43) and regulates the turnover of Cx43 through the proteasomal pathway. PLIC proteins contain an N-terminal ubiquitin-like (UBL) domain that is responsible for the binding of ubiquitin-interacting motifs (UIMs) expressed by proteasomes and endocytic adaptors, and C-terminal ubiquitin-associated (UBA) domain that interacts with ubiquitin chains present on proteins destined for proteasomal degradation. In addition, mammalian PLIC2 proteins have an extra collagen-like motif region which is absent in other PLIC proteins and the yeast Dsk2 protein.
Statistics
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PSSM-Id: 270582
Aligned: 46 rows
Threshold Bit Score: 61.7781
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
polypeptide
Conserved site includes 12 residues -Click on image for an interactive view with Cn3D
Feature 1:polypeptide substrate binding site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ######               #  ### ##
2JY6_B        11 RFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLG 50  human
EEN54790     466 RFRSQLEQLETMGFVNRAANIQALTATNGDVNAAIDRLLQ 505 Florida lancelet
XP_002733865 538 RFRVQLEQLNAMGFIDREANIRALQQTGGDLNAAIERLLG 577 Saccoglossus kowalevskii
XP_003388367 547 RYRVQLNILEGMGFLERTANLQALMEANGDINTAIDKLLN 586 Amphimedon queenslandica
CCD60789     499 RYQAELEILANMGFVNREANLQALIATFGDVNAAIDRLLQ 538 Schistosoma mansoni
XP_783007    567 RFEPQLQLLATMGFVDREANIRALTATGGDVNAAIDRLIQ 606 purple urchin
XP_003885149 377 RFRFQLQQLEAMGFVETQKNVEALEAVNGNLNAAIDRLLG 416 Neospora caninum Liverpool
EKX51678     434 RFRTQLEKLRDMGFSDQQANLSALQATNGNIDAAIDRLLS 473 Guillardia theta CCMP2712
ELU14398     512 RYAAQLDQLTGMGFVNREANLQALIATVGDVNAAIDRLLQ 551 Capitella sp. I Grassle & Grassle, 1976
Q9NIF3       484 RFRLQLEQLEELGFVDRAANISALTSTNGNINLAIDRLLR 523 Dictyostelium discoideum AX4

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